RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 H3BQ15 152 aa17.15■□□□□ 0.34
CDHR3-207ENST00000470188 SRPXP78539 464 aa17.15■□□□□ 0.34
CDHR3-207ENST00000470188 NHLH2Q02577 135 aa17.15■□□□□ 0.34
CDHR3-207ENST00000470188 GNMTQ14749 295 aa17.15■□□□□ 0.34
CDHR3-207ENST00000470188 ZNF573Q86YE8 665 aa17.15■□□□□ 0.34
CDHR3-207ENST00000470188 ZNF383Q8NA42 475 aa17.15■□□□□ 0.34
CDHR3-207ENST00000470188 GFOD1Q9NXC2 390 aa17.15■□□□□ 0.34
CDHR3-207ENST00000470188 KIAA1456Q9P272 454 aa17.15■□□□□ 0.34
CDHR3-207ENST00000470188 KIR2DS1A0A191URI9 304 aa17.14■□□□□ 0.33
CDHR3-207ENST00000470188 OR5B21A6NL26 309 aa17.14■□□□□ 0.33
CDHR3-207ENST00000470188 TAGLN2P37802 199 aaKnown RBP17.14■□□□□ 0.33
CDHR3-207ENST00000470188 KIR2DS4P43632 304 aa17.14■□□□□ 0.33
CDHR3-207ENST00000470188 NOVA1P51513 510 aaKnown RBP17.14■□□□□ 0.33
CDHR3-207ENST00000470188 GNG3P63215 75 aa17.14■□□□□ 0.33
CDHR3-207ENST00000470188 KIR2DS1Q14954 304 aa17.14■□□□□ 0.33
CDHR3-207ENST00000470188 SPIN3Q5JUX0 258 aa17.14■□□□□ 0.33
CDHR3-207ENST00000470188 LINC00596Q86U02 117 aa17.14■□□□□ 0.33
CDHR3-207ENST00000470188 TMEM178AQ8NBL3 297 aa17.14■□□□□ 0.33
CDHR3-207ENST00000470188 OR13D1Q8NGV5 346 aa17.14■□□□□ 0.33
CDHR3-207ENST00000470188 RAB39BQ96DA2 213 aa17.14■□□□□ 0.33
CDHR3-207ENST00000470188 ZNF488Q96MN9 340 aa17.14■□□□□ 0.33
CDHR3-207ENST00000470188 RCL1Q9Y2P8 373 aaKnown RBP17.14■□□□□ 0.33
CDHR3-207ENST00000470188 ELOA3CA0A087WX78 387 aaPredicted RBP17.13■□□□□ 0.33
CDHR3-207ENST00000470188 TRDCB7Z8K6 153 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 SPINK2P20155 84 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 EWSR1Q01844 656 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDHR3-207ENST00000470188 HERPUD1Q15011 391 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 ELOBQ15370 118 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 TRIP6Q15654 476 aaKnown RBP17.13■□□□□ 0.33
CDHR3-207ENST00000470188 ZNF674Q2M3X9 581 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 TMEM222Q9H0R3 208 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 UFSP2Q9NUQ7 469 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 ZNF318Q5VUA4 2279 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 GALR2O43603 387 aaPredicted RBP17.13■□□□□ 0.33
CDHR3-207ENST00000470188 RD3LP0DJH9 198 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 HIST1H1BP16401 226 aaKnown RBP17.13■□□□□ 0.33
CDHR3-207ENST00000470188 UBE2KP61086 200 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 OR2T2Q6IF00 324 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 TMPRSS7Q7RTY8 843 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 TBC1D26Q86UD7 250 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 BOD1Q96IK1 185 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 ZDHHC11Q9H8X9 412 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 MMP24Q9Y5R2 645 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 ATP23Q9Y6H3 246 aa17.13■□□□□ 0.33
CDHR3-207ENST00000470188 ARHGAP21Q5T5U3 1957 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 HSD17B6O14756 317 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 SPATA46Q5T0L3 261 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 OR4D5Q8NGN0 318 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 OR2G3Q8NGZ4 309 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 GP6Q9HCN6 339 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 UBE2J1Q9Y385 318 aaPredicted RBP17.12■□□□□ 0.33
CDHR3-207ENST00000470188 SRP19P09132 144 aaKnown RBP17.12■□□□□ 0.33
CDHR3-207ENST00000470188 CTXN2P0C2S0 81 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 CA6P23280 308 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 RND3P61587 244 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 IL24Q13007 206 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 SPSB3Q6PJ21 355 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 ZNF818PQ6ZRF7 136 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 VASH2Q86V25 355 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 Q8WTZ3 238 aa17.12■□□□□ 0.33
CDHR3-207ENST00000470188 RIMS4Q9H426 269 aaPredicted RBP17.12■□□□□ 0.33
CDHR3-207ENST00000470188 A0A1B0GV50 99 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 GPR37O15354 613 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 PITX3O75364 302 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 TUSC2O75896 110 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 HSPB1P04792 205 aaKnown RBP17.11■□□□□ 0.33
CDHR3-207ENST00000470188 TBC1D28Q2M2D7 210 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 FAM58AQ8N1B3 248 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 GAPTQ8N292 157 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 OR2C3Q8N628 320 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 GTF3AQ92664 365 aaKnown RBP17.11■□□□□ 0.33
CDHR3-207ENST00000470188 IGKV1D-13A0A0B4J2D9 117 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 HS3ST1O14792 307 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 PPP1R2P9O14990 202 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 HSPA12AO43301 675 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 CDS2O95674 445 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 IGKV1-13P0DP09 117 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 P4HA3Q7Z4N8 544 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 ZNF695Q8IW36 515 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 C17orf78Q8N4C9 275 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 MRPL30Q8TCC3 161 aaKnown RBP17.11■□□□□ 0.33
CDHR3-207ENST00000470188 TVP23CQ96ET8 276 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 TMEM56Q96MV1 263 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 PKIBQ9C010 78 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 PRDM13Q9H4Q3 707 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 TMEM56-RWDD3S4R434 201 aa17.11■□□□□ 0.33
CDHR3-207ENST00000470188 IGKV1-6A0A0C4DH72 117 aa17.1■□□□□ 0.33
CDHR3-207ENST00000470188 MED19A0JLT2 244 aaPredicted RBP17.1■□□□□ 0.33
CDHR3-207ENST00000470188 NKX2-6A6NCS4 301 aa17.1■□□□□ 0.33
CDHR3-207ENST00000470188 ZNF727A8MUV8 499 aa17.1■□□□□ 0.33
CDHR3-207ENST00000470188 ATP6V0CP27449 155 aa17.1■□□□□ 0.33
CDHR3-207ENST00000470188 CCL20P78556 96 aa17.1■□□□□ 0.33
CDHR3-207ENST00000470188 DLK1P80370 383 aa17.1■□□□□ 0.33
CDHR3-207ENST00000470188 PMP22Q01453 160 aa17.1■□□□□ 0.33
CDHR3-207ENST00000470188 OR10D4PQ8NGN7 298 aa17.1■□□□□ 0.33
CDHR3-207ENST00000470188 RDH5Q92781 318 aa17.1■□□□□ 0.33
CDHR3-207ENST00000470188 GMPPAQ96IJ6 420 aaPredicted RBP17.1■□□□□ 0.33
CDHR3-207ENST00000470188 OR51I2Q9H344 312 aa17.1■□□□□ 0.33
CDHR3-207ENST00000470188 C11orf1Q9H5F2 150 aa17.1■□□□□ 0.33
CDHR3-207ENST00000470188 TRAV24A0A0B4J272 114 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms