RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 TMEM104Q8NE00 496 aa13.07□□□□□ -0.32
GTF3C2-209ENST00000470115 OR5AU1Q8NGC0 362 aa13.07□□□□□ -0.32
GTF3C2-209ENST00000470115 OR10X1Q8NGY0 326 aa13.07□□□□□ -0.32
GTF3C2-209ENST00000470115 SELENOIQ9C0D9 397 aa13.07□□□□□ -0.32
GTF3C2-209ENST00000470115 SPACA1Q9HBV2 294 aa13.07□□□□□ -0.32
GTF3C2-209ENST00000470115 RCC2Q9P258 522 aaKnown RBP13.07□□□□□ -0.32
GTF3C2-209ENST00000470115 PRKDCP78527 4128 aaKnown RBP13.07□□□□□ -0.32
GTF3C2-209ENST00000470115 ADARB2-AS1A8MUL3 147 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 AIPO00170 330 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 CRTAPO75718 401 aaPredicted RBP13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 LPLP06858 475 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 SNRNP70P08621 437 aaKnown RBP13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 FAM106CPP0CH98 169 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 MGMTP16455 207 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 GP2P55259 537 aaKnown RBP13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 RPS25P62851 125 aaKnown RBP13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 GPR50Q13585 617 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 TPBGQ13641 420 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 FAM27D1Q5T7N8 215 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 UBE2UQ5VVX9 321 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 RAB12Q6IQ22 244 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 FAM53AQ6NSI3 398 aaPredicted RBP13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 CENPVQ7Z7K6 275 aaPredicted RBP13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 NDUFA11Q86Y39 141 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 THNSL2Q86YJ6 484 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 DRAM1Q8N682 238 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 OR56B4Q8NH76 319 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 THRSPQ92748 146 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 ETAA1Q9NY74 926 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 PEX16Q9Y5Y5 336 aa13.06□□□□□ -0.32
GTF3C2-209ENST00000470115 IGHV3-43A0A0B4J1X8 118 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 A0A1W2PPI3 338 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 SDCBPO00560 298 aaPredicted RBP13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 ORC5O43913 435 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 IGHV3-43DP0DP04 118 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 RAB7AP51149 207 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 TRAM1Q15629 374 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 C9orf152Q5JTZ5 239 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 CEACAM19Q7Z692 300 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 NKAIN3Q8N8D7 197 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 OR52M1Q8NGK5 317 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 OR4K15Q8NH41 348 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 R3HDM4Q96D70 268 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 CYYR1Q96J86 154 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 Q96M66 194 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 UQCC2Q9BRT2 126 aa13.05□□□□□ -0.32
GTF3C2-209ENST00000470115 UBE2QL1A1L167 161 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 FAM90A10PA6NDY2 464 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 FAM90A7PA6NKC0 464 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 FAM90A23PA8MXZ1 464 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 C12orf77C9JDV5 145 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 G3V4G9 280 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 M0QZK8 103 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 CCRL2O00421 344 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 FUT3P21217 361 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 PSMA1P25786 263 aaKnown RBP13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 LOXL3P58215 753 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 CD83Q01151 205 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 HES1Q14469 280 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 HNF4GQ14541 408 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 SYT6Q5T7P8 510 aaPredicted RBP13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 SIGIRRQ6IA17 410 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 OR8H3Q8N146 312 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 FAM46BQ96A09 425 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 GFOD1Q9NXC2 390 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 TRAPPC2LQ9UL33 140 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 MOB4Q9Y3A3 225 aa13.04□□□□□ -0.32
GTF3C2-209ENST00000470115 A0A1W2PRX2 142 aa13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 HSD17B6O14756 317 aa13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 SPINT2O43291 252 aa13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 GAPDHP04406 335 aaKnown RBP13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 TMEM11P17152 192 aa13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 REG1BP48304 166 aa13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 ZNF816Q0VGE8 651 aaPredicted RBP13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 SSX1Q16384 188 aa13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 TCTEX1D4Q5JR98 221 aa13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 MOB3BQ86TA1 216 aa13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 LRRTM1Q86UE6 522 aa13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 GAPTQ8N292 157 aa13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 LINC00311Q8N616 119 aa13.03□□□□□ -0.32
GTF3C2-209ENST00000470115 IGHV1-3A0A0C4DH29 117 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 PLXNB1O43157 2135 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 MPIG6BO95866 241 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 IGKV1D-33P01593 117 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 IGKV1-33P01594 117 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 HBZP02008 142 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 GLAP06280 429 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 RCC1P18754 421 aaPredicted RBP13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 HSD17B12Q53GQ0 312 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 C1orf100Q5SVJ3 147 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 OR10K2Q6IF99 312 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 C10orf99Q6UWK7 81 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 PRR18Q8N4B5 295 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 C8orf31Q8N9H6 132 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 OR4F17Q8NGA8 305 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 OR1L1Q8NH94 360 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 PHYHIPQ92561 330 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 OR4F4Q96R69 305 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 NDUFB11Q9NX14 153 aa13.02□□□□□ -0.33
GTF3C2-209ENST00000470115 GHRLQ9UBU3 117 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms