RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 KHDC3LQ587J8 217 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 ABHD17BQ5VST6 288 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 ADAM5Q6NVV9 412 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 TMEM251Q8N6I4 163 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 TMEM217Q8N7C4 229 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 TMEM105Q8N8V8 129 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 ZNF488Q96MN9 340 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 J3QT63 122 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 TNFSF12O43508 249 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 IGKV1-39P01597 117 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 IGKV1D-39P04432 117 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 ZNF883P0CG24 379 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 PLP2Q04941 152 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 OR1C1Q15619 314 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 ACSF3Q4G176 576 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-209ENST00000470026 NUFIP2Q7Z417 695 aaKnown RBP11.6□□□□□ -0.55
BRCA1-209ENST00000470026 STX12Q86Y82 276 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 OR10V1Q8NGI7 309 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 RAB39BQ96DA2 213 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 STRADBQ9C0K7 418 aa11.6□□□□□ -0.55
BRCA1-209ENST00000470026 ERRFI1Q9UJM3 462 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-209ENST00000470026 ARHGAP21Q5T5U3 1957 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 IFNA17P01571 189 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 PSG2P11465 335 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 CBR1P16152 277 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 MDH2P40926 338 aaKnown RBP11.59□□□□□ -0.55
BRCA1-209ENST00000470026 RPL23AP62750 156 aaKnown RBP11.59□□□□□ -0.55
BRCA1-209ENST00000470026 TESK1Q15569 626 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 Q6ZRM9 215 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 MOB1BQ7L9L4 216 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 SLC35E3Q7Z769 313 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 NANPQ8TBE9 248 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 RDH5Q92781 318 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 GPR87Q9BY21 358 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 LOC102723971A0A1B0GUV8 181 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 CXorf65A6NEN9 183 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 FAM166BA8MTA8 275 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 HS3ST1O14792 307 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 S100A9P06702 114 aaKnown RBP11.59□□□□□ -0.55
BRCA1-209ENST00000470026 SERPINE2P07093 398 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 RAB2AP61019 212 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 C17orf78Q8N4C9 275 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 CDX2Q99626 313 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-209ENST00000470026 SIRT7Q9NRC8 400 aa11.59□□□□□ -0.55
BRCA1-209ENST00000470026 C21orf140B9A014 251 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 H0YL77 283 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 PPIHO43447 177 aaKnown RBP11.58□□□□□ -0.56
BRCA1-209ENST00000470026 CNOT4O95628 575 aaKnown RBP11.58□□□□□ -0.56
BRCA1-209ENST00000470026 IL18BPO95998 194 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 APLNRP35414 380 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 OR2B8PP59922 312 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 ERVK11-1P61568 191 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 TCEAL6Q6IPX3 200 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 SLC16A13Q7RTY0 426 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 ZNF429Q86V71 674 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 CYB561D1Q8N8Q1 229 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 OR1K1Q8NGR3 316 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 OR51H1Q8NH63 302 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 MBD3L1Q8WWY6 194 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 BCL2L2Q92843 193 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-209ENST00000470026 PSMG3Q9BT73 122 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-209ENST00000470026 PARD6GQ9BYG4 376 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-209ENST00000470026 OR1A1Q9P1Q5 309 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 ABI3Q9P2A4 366 aa11.58□□□□□ -0.56
BRCA1-209ENST00000470026 J3QW42 95 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 RHBDL1O75783 438 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 NXPH3O95157 252 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 IFNA5P01569 189 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 IGKV1-5P01602 117 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 NQO2P16083 231 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 EIF2S3P41091 472 aaKnown RBP11.57□□□□□ -0.56
BRCA1-209ENST00000470026 CD200P41217 278 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 DLK1P80370 383 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 CLN3Q13286 438 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 ZNF585BQ52M93 769 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 DCAF10Q5QP82 559 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 ZNF497Q6ZNH5 498 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 C1orf210Q8IVY1 113 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 TVP23CQ96ET8 276 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 FOXJ2Q9P0K8 574 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 A0A1W2PNU3 283 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-209ENST00000470026 ARGFXA6NJG6 315 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 SYNGR2O43760 224 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 CLN5O75503 358 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 ITGA3P26006 1051 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 TAGLN2P37802 199 aaKnown RBP11.57□□□□□ -0.56
BRCA1-209ENST00000470026 UBE2KP61086 200 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 ELOBQ15370 118 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 THNSL2Q86YJ6 484 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 ZNF525Q8N782 197 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 TCTEX1D2Q8WW35 142 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 SMOC1Q9H4F8 434 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 MBNL3Q9NUK0 354 aaKnown RBP11.57□□□□□ -0.56
BRCA1-209ENST00000470026 PRSS50Q9UI38 385 aa11.57□□□□□ -0.56
BRCA1-209ENST00000470026 ZNF407Q9C0G0 2248 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 FBP1P09467 338 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 JMJD7P0C870 316 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 HOXA5P20719 270 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 OR2T2Q6IF00 324 aa11.56□□□□□ -0.56
BRCA1-209ENST00000470026 WDR86Q86TI4 376 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms