RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 PCDHB10Q9UN67 800 aa6.73□□□□□ -1.33
NPHP3-204ENST00000469232 HECTD1Q9ULT8 2610 aa6.73□□□□□ -1.33
NPHP3-204ENST00000469232 MEIKINA0A087WXM9 373 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 PPIAL4CA0A0B4J2A2 164 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 KBTBD11-OT1A0A1B0GTJ5 212 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 hADV38S2A0JD32 116 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 ZNF729A6NN14 1252 aaPredicted RBP6.72□□□□□ -1.33
NPHP3-204ENST00000469232 C17orf98A8MV24 154 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 ITGB1BP1O14713 200 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 SCTP09683 121 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 GSTT2P0CG29 244 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 HRH1P35367 487 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 FAUP35544 74 aaKnown RBP6.72□□□□□ -1.33
NPHP3-204ENST00000469232 RAG2P55895 527 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 LOXL3P58215 753 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 Q3ZCU0 254 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 RNASE12Q5GAN4 147 aaKnown RBP6.72□□□□□ -1.33
NPHP3-204ENST00000469232 RNASE10Q5GAN6 216 aaKnown RBP6.72□□□□□ -1.33
NPHP3-204ENST00000469232 ZNF57Q68EA5 555 aaPredicted RBP6.72□□□□□ -1.33
NPHP3-204ENST00000469232 TMEM200BQ69YZ2 307 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 CLEC2AQ6UVW9 174 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 NLRC3Q7RTR2 1065 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 FGFRL1Q8N441 504 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 OR8B3Q8NGG8 313 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 CLDND2Q8NHS1 167 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 COX4I2Q96KJ9 171 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 OR8B2Q96RD0 313 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 PIMREGQ9BSJ6 248 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 TINAGL1Q9GZM7 467 aaPredicted RBP6.72□□□□□ -1.33
NPHP3-204ENST00000469232 UNKLQ9H9P5 680 aaKnown RBP6.72□□□□□ -1.33
NPHP3-204ENST00000469232 TAF9BQ9HBM6 251 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 C19orf12Q9NSK7 152 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 CLN8Q9UBY8 286 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 RPUSD1Q9UJJ7 312 aaKnown RBP6.72□□□□□ -1.33
NPHP3-204ENST00000469232 IGHV4-30-2A0A087WSY4 118 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 A0A087X0M5 115 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 A0A1B0GX30 115 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 M0QYG6 137 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 RPS2P15880 293 aaKnown RBP6.72□□□□□ -1.33
NPHP3-204ENST00000469232 HLA-DMAP28067 261 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 CD34P28906 385 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 UCP3P55916 312 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 SEC61A1P61619 476 aaKnown RBP6.72□□□□□ -1.33
NPHP3-204ENST00000469232 RGS21Q2M5E4 152 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 CHRFAM7AQ494W8 412 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 AADACL3Q5VUY0 350 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 MZT2BQ6NZ67 158 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 HEPN1Q6WQI6 88 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 C1orf122Q6ZSJ8 110 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 NRARPQ7Z6K4 114 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 H1FOOQ8IZA3 346 aaPredicted RBP6.72□□□□□ -1.33
NPHP3-204ENST00000469232 C8orf31Q8N9H6 132 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 ZNF565Q8N9K5 539 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 POC5Q8NA72 575 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 OR13C8Q8NGS7 320 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 OR5H2Q8NGV7 314 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 ZNF596Q8TC21 504 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 MAFIPQ8WZ33 124 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 PRRT1Q99946 306 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 RAB9BQ9NP90 201 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 NECAP2Q9NVZ3 263 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 CALYQ9NYX4 217 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 COPZ2Q9P299 210 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 TRAPPC2LQ9UL33 140 aa6.72□□□□□ -1.33
NPHP3-204ENST00000469232 PRRC2AP48634 2157 aaKnown RBP6.71□□□□□ -1.34
NPHP3-204ENST00000469232 TRGV10A0A0A0MS01 117 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 IGHV4-61A0A0C4DH41 118 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 CENPXA8MT69 81 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 DISC1C4P0D8 188 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 C22orf46C9J442 243 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 NDUFB6O95139 128 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 HBZP02008 142 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF728P0DKX0 622 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 OR5H8P0DN80 308 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 FPR2P25090 351 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 RPL31P62899 125 aaKnown RBP6.71□□□□□ -1.34
NPHP3-204ENST00000469232 LOXL1Q08397 574 aaPredicted RBP6.71□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF273Q14593 569 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 SURF2Q15527 256 aaPredicted RBP6.71□□□□□ -1.34
NPHP3-204ENST00000469232 MSMO1Q15800 293 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 CLEC12BQ2HXU8 276 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 IGSF11Q5DX21 431 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 CD276Q5ZPR3 534 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 BTN2A1Q7KYR7 527 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 KIR3DL3Q8N743 410 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 TPRX1Q8N7U7 411 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 OR51S1Q8NGJ8 323 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 OR56B4Q8NH76 319 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 OR1L1Q8NH94 360 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 TERB2Q8NHR7 220 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 MRGPRDQ8TDS7 321 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 CCDC107Q8WV48 283 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 MOB3AQ96BX8 217 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 RAB39BQ96DA2 213 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 PERPQ96FX8 193 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 FOXC2Q99958 501 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 SLC25A21Q9BQT8 299 aaPredicted RBP6.71□□□□□ -1.34
NPHP3-204ENST00000469232 MARVELD1Q9BSK0 173 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 ALX4Q9H161 411 aaPredicted RBP6.71□□□□□ -1.34
NPHP3-204ENST00000469232 CHMP1AQ9HD42 196 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms