RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 GFRA3O60609 400 aa8.64□□□□□ -1.03
NUP50-214ENST00000469163 JTBO76095 146 aa8.64□□□□□ -1.03
NUP50-214ENST00000469163 SRMP19623 302 aa8.64□□□□□ -1.03
NUP50-214ENST00000469163 IL11P20809 199 aa8.64□□□□□ -1.03
NUP50-214ENST00000469163 CDKN2AP42771 156 aaKnown RBP8.64□□□□□ -1.03
NUP50-214ENST00000469163 SLC6A8P48029 635 aa8.64□□□□□ -1.03
NUP50-214ENST00000469163 TMPRSS12Q86WS5 348 aa8.64□□□□□ -1.03
NUP50-214ENST00000469163 TMEM256Q8N2U0 113 aa8.64□□□□□ -1.03
NUP50-214ENST00000469163 TMEM106BQ9NUM4 274 aa8.64□□□□□ -1.03
NUP50-214ENST00000469163 FBXL17Q9UF56 701 aa8.64□□□□□ -1.03
NUP50-214ENST00000469163 WSB1Q9Y6I7 421 aa8.64□□□□□ -1.03
NUP50-214ENST00000469163 ADGRG4Q8IZF6 3080 aa8.64□□□□□ -1.03
NUP50-214ENST00000469163 RBFOX3A6NFN3 312 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 CCL3P10147 92 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 TAS2R43P59537 309 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 CEACAM21Q3KPI0 293 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 WIPI1Q5MNZ9 446 aaPredicted RBP8.63□□□□□ -1.03
NUP50-214ENST00000469163 RPL22L1Q6P5R6 122 aaKnown RBP8.63□□□□□ -1.03
NUP50-214ENST00000469163 THSD4Q6ZMP0 1018 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 SIGMAR1Q99720 223 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 ARHGDIGQ99819 225 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 TMEM140Q9NV12 185 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 INTS1Q8N201 2190 aaKnown RBP8.63□□□□□ -1.03
NUP50-214ENST00000469163 USF3Q68DE3 2245 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 PDE6DO43924 150 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 KNG1P01042 644 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 SMIM10L1P0DMW3 83 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 HTR1FP30939 366 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 GUCA1AP43080 201 aaPredicted RBP8.63□□□□□ -1.03
NUP50-214ENST00000469163 RAB11AP62491 216 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 LTBQ06643 244 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 RAB32Q13637 225 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 MEP1BQ16820 701 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 RSPO4Q2I0M5 234 aaPredicted RBP8.63□□□□□ -1.03
NUP50-214ENST00000469163 COA6Q5JTJ3 125 aaKnown RBP8.63□□□□□ -1.03
NUP50-214ENST00000469163 LINC00346Q8IVM7 164 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 OR4P4Q8NGL7 312 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 FAM46BQ96A09 425 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 STARD4Q96DR4 205 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 SMIM10Q96HG1 83 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 SCRT1Q9BWW7 348 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 PGPEP1Q9NXJ5 209 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 THYN1Q9P016 225 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 MRPS28Q9Y2Q9 187 aaKnown RBP8.63□□□□□ -1.03
NUP50-214ENST00000469163 LOC101059948A0A1B0GTJ6 334 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 OR2T8A6NH00 312 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 TAAR5O14804 337 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 SIVA1O15304 175 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 DDAH2O95865 285 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 CYB5AP00167 134 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 FBXO45P0C2W1 286 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 CDKN1AP38936 164 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 PPICP45877 212 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 KRTDAPP60985 99 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 PRSS8Q16651 343 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 PRSS54Q6PEW0 395 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 TEX43Q6ZNM6 134 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 LRRC69Q6ZNQ3 347 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 RASL10BQ96S79 203 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 HSPB9Q9BQS6 159 aa8.63□□□□□ -1.03
NUP50-214ENST00000469163 HINT3Q9NQE9 182 aaKnown RBP8.63□□□□□ -1.03
NUP50-214ENST00000469163 FASNP49327 2511 aaKnown RBP8.62□□□□□ -1.03
NUP50-214ENST00000469163 TRBV2A0A0J9YWF9 115 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 CDS2O95674 445 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 EPPINO95925 133 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 CSTBP04080 98 aaKnown RBP8.62□□□□□ -1.03
NUP50-214ENST00000469163 ESDP10768 282 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 SSR4P51571 173 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 SRSF4Q08170 494 aaKnown RBP8.62□□□□□ -1.03
NUP50-214ENST00000469163 GTF2H5Q6ZYL4 71 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 SLC16A9Q7RTY1 509 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 ZNF550Q7Z398 422 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 BATF2Q8N1L9 274 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 FER1L6-AS1Q8NA97 138 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 NMNAT2Q9BZQ4 307 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 GEMIN7Q9H840 131 aaKnown RBP8.62□□□□□ -1.03
NUP50-214ENST00000469163 TMEM38BQ9NVV0 291 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 PRR13Q9NZ81 148 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 PPIAL4EA0A075B759 164 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 PPIAL4CA0A0B4J2A2 164 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 PPIAL4DF5H284 164 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 H7BYZ3 331 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 PPIAL4FP0DN26 164 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 PGCP20142 388 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 FCGR2CP31995 323 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 CNN1P51911 297 aaKnown RBP8.62□□□□□ -1.03
NUP50-214ENST00000469163 SCAND1P57086 179 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 PCBP3P57721 371 aaKnown RBP8.62□□□□□ -1.03
NUP50-214ENST00000469163 PLP1P60201 277 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 PAFAH1B2P68402 229 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 ARF1P84077 181 aaKnown RBP8.62□□□□□ -1.03
NUP50-214ENST00000469163 FOXF1Q12946 379 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 MORN2Q502X0 79 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 ALG10Q5BKT4 473 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 FBXW12Q6X9E4 464 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 LFNGQ8NES3 379 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 ZNF721Q8TF20 911 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 ZC2HC1AQ96GY0 325 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 PGLYRP3Q96LB9 341 aa8.62□□□□□ -1.03
NUP50-214ENST00000469163 RBM24Q9BX46 236 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms