RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 AMBNQ9NP70 447 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 ERVK13-1Q9NX77 482 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 TAS2R4Q9NYW5 299 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 ING4Q9UNL4 249 aa9.56□□□□□ -0.88
COL5A1-207ENST00000469093 SIRT4Q9Y6E7 314 aaPredicted RBP9.56□□□□□ -0.88
COL5A1-207ENST00000469093 TENM2Q9NT68 2774 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 IGHV3-43A0A0B4J1X8 118 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 SLC31A2O15432 143 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 FADS2O95864 444 aaKnown RBP9.55□□□□□ -0.88
COL5A1-207ENST00000469093 IGF1P05019 195 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 IGHV3-43DP0DP04 118 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 CHATP28329 748 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 SOX6P35712 828 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 ZNF134P52741 427 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 GBX2P52951 348 aaPredicted RBP9.55□□□□□ -0.88
COL5A1-207ENST00000469093 RBM11P57052 281 aaKnown RBP9.55□□□□□ -0.88
COL5A1-207ENST00000469093 KIAA0141Q14154 515 aaPredicted RBP9.55□□□□□ -0.88
COL5A1-207ENST00000469093 KLHL22Q53GT1 634 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 RGP1Q92546 391 aaPredicted RBP9.55□□□□□ -0.88
COL5A1-207ENST00000469093 KCTD7Q96MP8 289 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 JAM3Q9BX67 310 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 METTL9Q9H1A3 318 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 KLK15Q9H2R5 256 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 IL36GQ9NZH8 169 aa9.55□□□□□ -0.88
COL5A1-207ENST00000469093 NKX1-2Q9UD57 310 aaPredicted RBP9.55□□□□□ -0.88
COL5A1-207ENST00000469093 ZNF256Q9Y2P7 627 aaPredicted RBP9.55□□□□□ -0.88
COL5A1-207ENST00000469093 CASQ2O14958 399 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-207ENST00000469093 VDAC1P21796 283 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 IL3RAP26951 378 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 ZNF137PP52743 207 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 Q3ZCU0 254 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 CT45A1Q5HYN5 189 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 ATAD3CQ5T2N8 411 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 ZNF497Q6ZNH5 498 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 SLC25A48Q6ZT89 311 aaKnown RBP9.54□□□□□ -0.88
COL5A1-207ENST00000469093 ZNF439Q8NDP4 499 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 ZNF555Q8NEP9 628 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 OR1N2Q8NGR9 330 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 CT45A3Q8NHU0 189 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 RHOXF1Q8NHV9 184 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 MYOZ3Q8TDC0 251 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 GPR148Q8TDV2 347 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 RDH12Q96NR8 316 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 TMEM138Q9NPI0 162 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 SMPD3Q9NY59 655 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-207ENST00000469093 ZNF580Q9UK33 172 aa9.54□□□□□ -0.88
COL5A1-207ENST00000469093 A0A1W2PP11 408 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 CSTBP04080 98 aaKnown RBP9.53□□□□□ -0.88
COL5A1-207ENST00000469093 PPIFP30405 207 aaKnown RBP9.53□□□□□ -0.88
COL5A1-207ENST00000469093 ZNF93P35789 620 aaPredicted RBP9.53□□□□□ -0.88
COL5A1-207ENST00000469093 RAB40BQ12829 278 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 MPV17LQ2QL34 196 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 CASC10Q5T4H9 136 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 OGFRL1Q5TC84 451 aaPredicted RBP9.53□□□□□ -0.88
COL5A1-207ENST00000469093 ASPHD1Q5U4P2 390 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 XAF1Q6GPH4 301 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 LINC00596Q86U02 117 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 SBSPONQ8IVN8 264 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 OR52I1Q8NGK6 324 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 UBE2E2Q96LR5 201 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 Q96MT0 163 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 CHCHD6Q9BRQ6 235 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 MRPS18AQ9NVS2 196 aaKnown RBP9.53□□□□□ -0.88
COL5A1-207ENST00000469093 GMPPBQ9Y5P6 360 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 WSB1Q9Y6I7 421 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 SMAD5-AS1Q9Y6J3 95 aa9.53□□□□□ -0.88
COL5A1-207ENST00000469093 C12orf77C9JDV5 145 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 I3L521 148 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 AIPO00170 330 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 TXNL1O43396 289 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 CD2P06729 351 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 LIMS3P0CW19 117 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 LIMS4P0CW20 117 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 OR5H8P0DN80 308 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 SLC2A2P11168 524 aaPredicted RBP9.52□□□□□ -0.89
COL5A1-207ENST00000469093 GTF2F2P13984 249 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 SERPINA2P20848 420 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 HSPA13P48723 471 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 INSL3P51460 131 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 SLC22A6Q4U2R8 563 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 SYT6Q5T7P8 510 aaPredicted RBP9.52□□□□□ -0.89
COL5A1-207ENST00000469093 DDI2Q5TDH0 399 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 STEAP3Q658P3 488 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 RPL22L1Q6P5R6 122 aaKnown RBP9.52□□□□□ -0.89
COL5A1-207ENST00000469093 ZNF491Q8N8L2 437 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 MUC7Q8TAX7 377 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 NEK7Q8TDX7 302 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 CYGBQ8WWM9 190 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 TMEM106AQ96A25 262 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 ORAI1Q96D31 301 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 RITA1Q96K30 269 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 S100A13Q99584 98 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 SLC29A1Q99808 456 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 GNB4Q9HAV0 340 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 PAK1IP1Q9NWT1 392 aaPredicted RBP9.52□□□□□ -0.89
COL5A1-207ENST00000469093 GNG12Q9UBI6 72 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 ZNF107Q9UII5 783 aaPredicted RBP9.52□□□□□ -0.89
COL5A1-207ENST00000469093 TRAPPC2LQ9UL33 140 aa9.52□□□□□ -0.89
COL5A1-207ENST00000469093 FAM90A10PA6NDY2 464 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms