RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 PFDN6O15212 129 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 SSNA1O43805 119 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 ENTPD6O75354 484 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 CLDN11O75508 207 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 TRAPPC6AO75865 159 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 DCTN3O75935 186 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 RAB36O95755 333 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 HBE1P02100 147 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 FAM228BP0C875 321 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 P0C880 135 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 LIMS3P0CW19 117 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 LIMS4P0CW20 117 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 SCGB1A1P11684 91 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 AKR1C4P17516 323 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 SRP9P49458 86 aaKnown RBP2.38□□□□□ -2.03
XRN1-207ENST00000468894 TTPAP49638 278 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 RAB7AP51149 207 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 STC1P52823 247 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 NAA20P61599 178 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 GUSBP1Q15486 140 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 C4orf26Q17RF5 130 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 TBC1D28Q2M2D7 210 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 DEFB115Q30KQ5 88 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 SYT6Q5T7P8 510 aaPredicted RBP2.38□□□□□ -2.03
XRN1-207ENST00000468894 RPL13AP3Q6NVV1 102 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 FAM131AQ6UXB0 335 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 SMIM20Q8N5G0 67 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 ST6GALNAC3Q8NDV1 305 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 C1orf64Q8NEQ6 169 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 OR11H1Q8NG94 326 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 GPR32P1Q8NGA4 272 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 OR11H2Q8NH07 326 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 C16orf78Q8WTQ4 265 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 RAB8BQ92930 207 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 TMBIM1Q969X1 311 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 RERGQ96A58 199 aaPredicted RBP2.38□□□□□ -2.03
XRN1-207ENST00000468894 SMIM19Q96E16 107 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 SFRP2Q96HF1 295 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 ERBINQ96RT1 1412 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 PHB2Q99623 299 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 CDX2Q99626 313 aaPredicted RBP2.38□□□□□ -2.03
XRN1-207ENST00000468894 SLC19A3Q9BZV2 496 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 DSN1Q9H410 356 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 DOCK5Q9H7D0 1870 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 METTL17Q9H7H0 456 aaPredicted RBP2.38□□□□□ -2.03
XRN1-207ENST00000468894 COA4Q9NYJ1 87 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 FBXO5Q9UKT4 447 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 ADGRL1O94910 1474 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 ZNF518AQ6AHZ1 1483 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 CLUHO75153 1309 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 TRIP11Q15643 1979 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 SCN10AQ9Y5Y9 1956 aa2.38□□□□□ -2.03
XRN1-207ENST00000468894 RTL9Q8NET4 1388 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 IGHV3-49A0A0A0MS15 119 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 IGHV1-69DA0A0B4J2H0 117 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 IGKV2-24A0A0C4DH68 120 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 HACD1B0YJ81 288 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 C15orf65H3BRN8 121 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 H7C1H1 209 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 H7C2Y5 167 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 KPNA4O00629 521 aaPredicted RBP2.37□□□□□ -2.03
XRN1-207ENST00000468894 SYNGR1O43759 233 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 SLC16A7O60669 478 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 OR2B3O76000 313 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 GPR75O95800 540 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 HTR1AP08908 422 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 FBP1P09467 338 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 CXCR1P25024 350 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 S100PP25815 95 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 SLC6A1P30531 599 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 TGFBR1P36897 503 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 MAP2K4P45985 399 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 TCL1AP56279 114 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 MAPK14Q16539 360 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 KLHL12Q53G59 568 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 MBOAT2Q6ZWT7 520 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 GALNT10Q86SR1 603 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 CBLN2Q8IUK8 224 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 WDR31Q8NA23 367 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 SLC26A10Q8NG04 563 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 STOML3Q8TAV4 291 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 HAVCR2Q8TDQ0 301 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 C11orf40Q8WZ69 217 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 QKIQ96PU8 341 aaKnown RBP eCLIP2.37□□□□□ -2.03
XRN1-207ENST00000468894 MED18Q9BUE0 208 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 YIPF3Q9GZM5 350 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 NXF2Q9GZY0 626 aaKnown RBP2.37□□□□□ -2.03
XRN1-207ENST00000468894 BOLA2Q9H3K6 86 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 TMEM138Q9NPI0 162 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 ZNF586Q9NXT0 402 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 TAS2R1Q9NYW7 299 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 HHLA2Q9UM44 414 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 PRELID3BQ9Y3B1 194 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 MRC2Q9UBG0 1479 aa2.37□□□□□ -2.03
XRN1-207ENST00000468894 NPATQ14207 1427 aa2.36□□□□□ -2.03
XRN1-207ENST00000468894 PPIP5K1Q6PFW1 1433 aa2.36□□□□□ -2.03
XRN1-207ENST00000468894 PHIPQ8WWQ0 1821 aa2.36□□□□□ -2.03
XRN1-207ENST00000468894 SMIM26A0A096LP01 95 aa2.36□□□□□ -2.03
XRN1-207ENST00000468894 IGHV1-3A0A0C4DH29 117 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms