RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 FAM90A14PP0C7W9 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 FAM90A24PP0C7X0 464 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 GP2P55259 537 aaKnown RBP15.23■□□□□ 0.03
COL7A1-207ENST00000467985 RPS25P62851 125 aaKnown RBP15.23■□□□□ 0.03
COL7A1-207ENST00000467985 TMEM95Q3KNT9 176 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 ABCA11PQ4W5N1 156 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 HIST2H2BDQ6DRA6 164 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 CENPVQ7Z7K6 275 aaPredicted RBP15.23■□□□□ 0.03
COL7A1-207ENST00000467985 OR5AU1Q8NGC0 362 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 UQCC2Q9BRT2 126 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 NDUFB11Q9NX14 153 aa15.23■□□□□ 0.03
COL7A1-207ENST00000467985 RCC2Q9P258 522 aaKnown RBP15.23■□□□□ 0.03
COL7A1-207ENST00000467985 TRAV39A0A0B4J263 110 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 A0A1W2PP11 408 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 IGHV3-7P01780 117 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 MT-ND4P03905 459 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 MAS1P04201 325 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 GNG10P50151 68 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 SSX1Q16384 188 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 AWAT2Q6E213 333 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 LYG1Q8N1E2 194 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 C8orf31Q8N9H6 132 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 ARL11Q969Q4 196 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 R3HDM4Q96D70 268 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 MOB4Q9Y3A3 225 aa15.22■□□□□ 0.03
COL7A1-207ENST00000467985 NOTCH3Q9UM47 2321 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 A0A1W2PPI3 338 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 AIPO00170 330 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 GLAP06280 429 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 LPLP06858 475 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 CD36P16671 472 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 TMEM30BQ3MIR4 351 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 Q3ZCU0 254 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 ACSM3Q53FZ2 586 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 GPR141Q7Z602 305 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 C1QL4Q86Z23 238 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 DRAM1Q8N682 238 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 OR56B4Q8NH76 319 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 GHRLQ9UBU3 117 aa15.21■□□□□ 0.03
COL7A1-207ENST00000467985 PLXNB1O43157 2135 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 ADARB2-AS1A8MUL3 147 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 C15orf65H3BRN8 121 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 SDCBPO00560 298 aaPredicted RBP15.2■□□□□ 0.02
COL7A1-207ENST00000467985 PIN1P1O15428 100 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 CA11O75493 328 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 AMY1AP04745 511 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 AMY2AP04746 511 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 SNRNP70P08621 437 aaKnown RBP15.2■□□□□ 0.02
COL7A1-207ENST00000467985 MGMTP16455 207 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 CD83Q01151 205 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 TIMM50Q3ZCQ8 353 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 C6orf183Q5T699 404 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 RAB12Q6IQ22 244 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 CEACAM19Q7Z692 300 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 LYPD6Q86Y78 171 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 LINC00311Q8N616 119 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 CCDC107Q8WV48 283 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 SELENOIQ9C0D9 397 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 ETAA1Q9NY74 926 aa15.2■□□□□ 0.02
COL7A1-207ENST00000467985 HSD17B6O14756 317 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 SPINT2O43291 252 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 CRTAPO75718 401 aaPredicted RBP15.19■□□□□ 0.02
COL7A1-207ENST00000467985 GAPDHP04406 335 aaKnown RBP15.19■□□□□ 0.02
COL7A1-207ENST00000467985 TMEM11P17152 192 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 FUT3P21217 361 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 IL3RAP26951 378 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 ZNF816Q0VGE8 651 aaPredicted RBP15.19■□□□□ 0.02
COL7A1-207ENST00000467985 HES1Q14469 280 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 FBLN7Q53RD9 439 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 KPRPQ5T749 579 aaPredicted RBP15.19■□□□□ 0.02
COL7A1-207ENST00000467985 TRAT1Q6PIZ9 186 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 OR4X2Q8NGF9 303 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 CST11Q9H112 138 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 GFOD1Q9NXC2 390 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 TRAPPC2LQ9UL33 140 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 STUB1Q9UNE7 303 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 SSR3Q9UNL2 185 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 PEX16Q9Y5Y5 336 aa15.19■□□□□ 0.02
COL7A1-207ENST00000467985 LOC100506127A0A0U1RQW1 187 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 G3V4G9 280 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 FGF16O43320 207 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 ARL6IP5O75915 188 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 UBBP0CG47 229 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 RPL5P46777 297 aaKnown RBP15.18■□□□□ 0.02
COL7A1-207ENST00000467985 LOXL3P58215 753 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 FABP5Q01469 135 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 BEAN1Q3B7T3 259 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 C9orf152Q5JTZ5 239 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 SAMD5Q5TGI4 173 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 GAPTQ8N292 157 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 PHYHIPQ92561 330 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 Q96M66 194 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 BANF2Q9H503 90 aa15.18■□□□□ 0.02
COL7A1-207ENST00000467985 TSSC4Q9Y5U2 329 aaPredicted RBP15.18■□□□□ 0.02
COL7A1-207ENST00000467985 A0A1W2PPE3 182 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 TCRBV4S1A1TA0A5B7 111 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 C12orf77C9JDV5 145 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 SC5DO75845 299 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 TFAP2AP05549 437 aa15.17■□□□□ 0.02
COL7A1-207ENST00000467985 GADD45AP24522 165 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms