RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 H0Y980 276 aa12.56□□□□□ -0.4
PRPF38B-204ENST00000467302 PPIHO43447 177 aaKnown RBP12.56□□□□□ -0.4
PRPF38B-204ENST00000467302 CHST1O43916 411 aa12.56□□□□□ -0.4
PRPF38B-204ENST00000467302 IFNA17P01571 189 aa12.56□□□□□ -0.4
PRPF38B-204ENST00000467302 KIR2DS4P43632 304 aa12.56□□□□□ -0.4
PRPF38B-204ENST00000467302 ICAM4Q14773 271 aa12.56□□□□□ -0.4
PRPF38B-204ENST00000467302 KIR2DS1Q14954 304 aa12.56□□□□□ -0.4
PRPF38B-204ENST00000467302 MPV17LQ2QL34 196 aa12.56□□□□□ -0.4
PRPF38B-204ENST00000467302 CCL28Q9NRJ3 127 aa12.56□□□□□ -0.4
PRPF38B-204ENST00000467302 TAAR3PQ9P1P4 343 aa12.56□□□□□ -0.4
PRPF38B-204ENST00000467302 A0A087WWC5 75 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 HSPB1P04792 205 aaKnown RBP12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 CTXN2P0C2S0 81 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 EIF2S3P41091 472 aaKnown RBP12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 TNFSF10P50591 281 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 CCL11P51671 97 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 ARF1P84077 181 aaKnown RBP12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 RNPS1Q15287 305 aaKnown RBP12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 ZNF506Q5JVG8 444 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 PCSK4Q6UW60 755 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 TMEM217Q8N7C4 229 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 TCTEX1D2Q8WW35 142 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 RAB39BQ96DA2 213 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 OR51M1Q9H341 326 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 LIPGQ9Y5X9 500 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 PGLYRP1O75594 196 aaPredicted RBP12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 SCAF4O95104 1147 aaKnown RBP12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 RUNX1Q01196 453 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 SRSF6Q13247 344 aaKnown RBP12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 C3AR1Q16581 482 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 TMPRSS7Q7RTY8 843 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 MCEMP1Q8IX19 187 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 CMTM1Q8IZ96 169 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 GTF3AQ92664 365 aaKnown RBP12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 ATP5SQ99766 215 aa12.55□□□□□ -0.4
PRPF38B-204ENST00000467302 H0YL77 283 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 SS18L1O75177 396 aaPredicted RBP12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 IL24Q13007 206 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 ZNF154Q13106 437 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 OR8G1Q15617 311 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 DPPA3Q6W0C5 159 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 ZDHHC23Q8IYP9 409 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 ZNF295-AS1Q8N0V1 137 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 CLDND2Q8NHS1 167 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 APH1AQ96BI3 265 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 TRBV6-6A0A0A6YYG2 114 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 TRGV5A0A0B4J1U4 118 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 ZNF727A8MUV8 499 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 KIAA1324LA8MWY0 1029 aaPredicted RBP12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 HSPB6O14558 160 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 TAS2R30P59541 319 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 RNFT1Q5M7Z0 435 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 AKR1C8PQ5T2L2 129 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 C9orf135Q5VTT2 229 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 C20orf204Q6ZNR8 217 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 CYB561D1Q8N8Q1 229 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 MRPL30Q8TCC3 161 aaKnown RBP12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 RBMXL1Q96E39 390 aaKnown RBP12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 TMPRSS5Q9H3S3 457 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 ZDHHC11Q9H8X9 412 aa12.54□□□□□ -0.4
PRPF38B-204ENST00000467302 TRAV1-1A0A0B4J248 108 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 A0A0G2JRQ6 117 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 C5orf49A4QMS7 147 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 ZNF503-AS2A6NEH8 195 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 TRAPPC2LH3BP13 241 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 ZNHIT1O43257 154 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 TXNL1O43396 289 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 COX5BP10606 129 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 CCL2P13500 99 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 CCNOP22674 350 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 F2RP25116 425 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 TAGLN2P37802 199 aaKnown RBP12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 DLK1P80370 383 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 ZNF324BQ6AW86 544 aaPredicted RBP12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 ZNF429Q86V71 674 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 MKXQ8IYA7 352 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 WDYHV1Q96HA8 205 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 RIMS4Q9H426 269 aaPredicted RBP12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 MIOXQ9UGB7 285 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 WSB1Q9Y6I7 421 aa12.53□□□□□ -0.4
PRPF38B-204ENST00000467302 A0A096LPE4 126 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 A0A1W2PPZ6 126 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 TNFSF12O43508 249 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 NXPH3O95157 252 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 HLA-HP01893 362 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 FBP1P09467 338 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 SLC25A6P12236 298 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 HOXA5P20719 270 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 RPS10P46783 165 aaKnown RBP12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 UBE2KP61086 200 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 TLE4Q04727 773 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 ELOBQ15370 118 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 IGFL2Q6UWQ7 119 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 MRPL21Q7Z2W9 205 aaKnown RBP12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 TNRC6AQ8NDV7 1962 aaKnown RBP12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 FDCSPQ8NFU4 85 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 OR5A2Q8NGI9 324 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 APOBEC3DQ96AK3 386 aaPredicted RBP12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 MMP24Q9Y5R2 645 aa12.52□□□□□ -0.4
PRPF38B-204ENST00000467302 A0A1B0GU03 582 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms