RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ABHD1Q96SE0 405 aa12.44□□□□□ -0.42
NPHP4-205ENST00000466897 SMR3AQ99954 134 aa12.44□□□□□ -0.42
NPHP4-205ENST00000466897 IDI2-AS1Q9NZ38 188 aa12.44□□□□□ -0.42
NPHP4-205ENST00000466897 MRPS7Q9Y2R9 242 aaKnown RBP12.44□□□□□ -0.42
NPHP4-205ENST00000466897 TRAV39A0A0B4J263 110 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 MEX3AA1L020 520 aaKnown RBP12.43□□□□□ -0.42
NPHP4-205ENST00000466897 FABP12A6NFH5 140 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 TRDCB7Z8K6 153 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 AVPP01185 164 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 FSHBP01225 129 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 HBZP02008 142 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 BPIFB3P59826 476 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 GUCA2AQ02747 115 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 SPANXN2Q5MJ10 180 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 LY6G6FQ5SQ64 297 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 STEAP3Q658P3 488 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 C1orf229Q6ZS94 237 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-205ENST00000466897 HOGA1Q86XE5 327 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 SNX29P2Q8IUI4 249 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 DTX3Q8N9I9 347 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 OR4A4PQ8NGN8 299 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 SETD6Q8TBK2 473 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 GALMQ96C23 342 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 PCGF1Q9BSM1 259 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 HEXA-AS1Q9H8Q6 139 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 ZNF286AQ9HBT8 521 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 YAE1D1Q9NRH1 226 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 JPT1Q9UK76 154 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 V9GYH0 126 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 TLN2Q9Y4G6 2542 aa12.43□□□□□ -0.42
NPHP4-205ENST00000466897 GABARAPH6UMI1 98 aa12.42□□□□□ -0.42
NPHP4-205ENST00000466897 MMP23AO75900 390 aa12.42□□□□□ -0.42
NPHP4-205ENST00000466897 PTHLHP12272 177 aa12.42□□□□□ -0.42
NPHP4-205ENST00000466897 HOXB4P17483 251 aaPredicted RBP12.42□□□□□ -0.42
NPHP4-205ENST00000466897 NAT1P18440 290 aa12.42□□□□□ -0.42
NPHP4-205ENST00000466897 LOXL3P58215 753 aa12.42□□□□□ -0.42
NPHP4-205ENST00000466897 SSBP1Q04837 148 aaKnown RBP12.42□□□□□ -0.42
NPHP4-205ENST00000466897 IL18Q14116 193 aa12.42□□□□□ -0.42
NPHP4-205ENST00000466897 PRAMEF5Q5TYX0 476 aa12.42□□□□□ -0.42
NPHP4-205ENST00000466897 C8orf31Q8N9H6 132 aa12.42□□□□□ -0.42
NPHP4-205ENST00000466897 SMIM4Q8WVI0 70 aa12.42□□□□□ -0.42
NPHP4-205ENST00000466897 CABLES2Q9BTV7 478 aa12.42□□□□□ -0.42
NPHP4-205ENST00000466897 TMEM133Q9H2Q1 129 aa12.42□□□□□ -0.42
NPHP4-205ENST00000466897 ZNF230Q9UIE0 474 aaPredicted RBP12.42□□□□□ -0.42
NPHP4-205ENST00000466897 MEIOCA2RUB1 952 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 FABP7O15540 132 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 GSTZ1O43708 216 aaPredicted RBP12.41□□□□□ -0.42
NPHP4-205ENST00000466897 HNF1AP20823 631 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 OMGP23515 440 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 GDNFP39905 211 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 UBE2E1P51965 193 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 ACTBP60709 375 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 ACTG1P63261 375 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 FAM120AOSQ5T036 256 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 HCP5Q6MZN7 132 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 FAM131AQ6UXB0 335 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 BEST4Q8NFU0 473 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 OR11H6Q8NGC7 330 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 OR13D1Q8NGV5 346 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 OR1L1Q8NH94 360 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 RFESDQ8TAC1 157 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 NANPQ8TBE9 248 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 FCAMRQ8WWV6 532 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 GCDHQ92947 438 aaPredicted RBP12.41□□□□□ -0.42
NPHP4-205ENST00000466897 TOLLIPQ9H0E2 274 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 IFT46Q9NQC8 304 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 SIRT7Q9NRC8 400 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 GFOD1Q9NXC2 390 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 ZNF107Q9UII5 783 aaPredicted RBP12.41□□□□□ -0.42
NPHP4-205ENST00000466897 ANXA10Q9UJ72 324 aa12.41□□□□□ -0.42
NPHP4-205ENST00000466897 IGHV2-26A0A0B4J1V2 119 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 RNASEK-C17orf49H0YIS7 233 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 SDCBPO00560 298 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-205ENST00000466897 SCTP09683 121 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 CTXN2P0C2S0 81 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 RCVRNP35243 200 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 ZNF45Q02386 682 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 ZNF79Q15937 498 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 KLF17Q5JT82 389 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-205ENST00000466897 GPR157Q5UAW9 335 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 ZNF782Q6ZMW2 699 aaPredicted RBP12.4□□□□□ -0.42
NPHP4-205ENST00000466897 PRR18Q8N4B5 295 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 ZNF596Q8TC21 504 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 FAM216AQ8WUB2 273 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 ST6GALNAC5Q9BVH7 336 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 CLEC7AQ9BXN2 247 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 MTFP1Q9UDX5 166 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 CDC42EP3Q9UKI2 254 aa12.4□□□□□ -0.42
NPHP4-205ENST00000466897 RBMX2Q9Y388 322 aaKnown RBP12.4□□□□□ -0.42
NPHP4-205ENST00000466897 TEP1Q99973 2627 aaKnown RBP12.39□□□□□ -0.43
NPHP4-205ENST00000466897 IGKV1D-8A0A087WSZ0 117 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 TRBV6-7A0A0A0MS04 114 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 TRAV40A0A0B4J280 105 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 IGHV1-69DA0A0B4J2H0 117 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 CENPVL3A0A0U1RRI6 287 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 ODF3BA8MYP8 253 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 ITGB1BP1O14713 200 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 YPEL1O60688 119 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 RGS11O94810 467 aa12.39□□□□□ -0.43
NPHP4-205ENST00000466897 IGHV1-69P01742 117 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms