RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PKMYT1Q99640 499 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 B9D2Q9BPU9 175 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 PRSS27Q9BQR3 290 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR2D2Q9H210 308 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 C1orf109Q9NX04 203 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 FBXL3Q9UKT7 428 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 BTRCQ9Y297 605 aa2.15□□□□□ -2.07
CDC42BPA-211ENST00000466538 LTBP4Q8N2S1 1624 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 TRBV24-1A0A075B6N3 115 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 EFCAB9A8MZ26 197 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 C9J4A7 227 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 GPR171O14626 319 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 LIN7AO14910 233 aaPredicted RBP2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 TRAPPC3O43617 180 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 RAB36O95755 333 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 OPN1SWP03999 348 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 GYPCP04921 128 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 SERPINA6P08185 405 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 COILP38432 576 aaPredicted RBP2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 ACTBP60709 375 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 RAB8AP61006 207 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 ACTG1P63261 375 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 FADDQ13158 208 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 ELP2Q6IA86 826 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 FAM173BQ6P4H8 233 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 WDR59Q6PJI9 974 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 BRD3OSQ6XYD6 125 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 PLEKHG7Q6ZR37 379 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 TCF24Q7RTU0 167 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 DCXRQ7Z4W1 244 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 MTERF4Q7Z6M4 381 aaKnown RBP2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 NIT1Q86X76 327 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 C2orf73Q8N5S3 287 aaPredicted RBP2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 KRTCAP2Q8N6L1 136 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 SPPL2BQ8TCT7 592 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 C7orf50Q9BRJ6 194 aaKnown RBP2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 ZNF426Q9BUY5 554 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 BCL2L14Q9BZR8 327 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 NSRP1Q9H0G5 558 aaKnown RBP2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR51E2Q9H255 320 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 DMAC2Q9NW81 257 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 ZSWIM8A7E2V4 1837 aa2.14□□□□□ -2.07
CDC42BPA-211ENST00000466538 IGHV3OR15-7A0A075B7D8 119 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 EPPINO95925 133 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 GUSBP08236 651 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 CTLA4P16410 223 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 ZNF708P17019 499 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 STC1P52823 247 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 MP68P56378 58 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 FAM3AP98173 230 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 SKP2Q13309 424 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 ITGB3BPQ13352 177 aaPredicted RBP2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 KRTAP25-1Q3LHN0 102 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 FAM151BQ6UXP7 276 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 LRRC34Q8IZ02 419 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 KRT222Q8N1A0 295 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 LY6G5BQ8NDX9 201 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 ATP6V1C2Q8NEY4 427 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR4P4Q8NGL7 312 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 RNASEH2CQ8TDP1 164 aaKnown RBP2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 KCTD4Q8WVF5 259 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 SLC25A44Q96H78 314 aaPredicted RBP2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 IGF2BP2-AS1Q96M15 143 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 PTPRKQ15262 1439 aa2.13□□□□□ -2.07
CDC42BPA-211ENST00000466538 CEP170Q5SW79 1584 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 A0A1B0GU33 70 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 ARGFXA6NJG6 315 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 TMEM210A6NLX4 147 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 F5H5K5 113 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 J3QLI3 93 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 OCMP0CE72 109 aaPredicted RBP2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 S100A2P29034 98 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 ACTR1BP42025 376 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 DLX6P56179 175 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 SAPCD1Q5SSQ6 148 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 LAIR2Q6ISS4 152 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 HCP5Q6MZN7 132 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 NIPAL1Q6NVV3 410 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 TTC33Q6PID6 262 aaPredicted RBP2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 TMPPEQ6ZT21 453 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 FUNDC1Q8IVP5 155 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 Q8NAQ8 132 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 CDC26Q8NHZ8 85 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 GALMQ96C23 342 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 DERL2Q9GZP9 239 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 ALX4Q9H161 411 aaPredicted RBP2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 FBXL15Q9H469 300 aa2.12□□□□□ -2.07
CDC42BPA-211ENST00000466538 DNMT1P26358 1616 aaKnown RBP2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 IGKV1D-37A0A075B6S9 117 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 A0A0A6YYH2 397 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 GOLGA6L10A6NI86 522 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 A6NJ64 397 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 SH2D1AO60880 128 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 LTAP01374 205 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 CTXN2P0C2S0 81 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 LGALS3P17931 250 aaKnown RBP2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 EVI2BP34910 448 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 BLVRAP53004 296 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 RAB2AP61019 212 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms