RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 ETAA1Q9NY74 926 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 DNAJB11Q9UBS4 358 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 ANXA10Q9UJ72 324 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 SCP2D1Q9UJQ7 156 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 ELF5Q9UKW6 265 aaPredicted RBP4.55□□□□□ -1.68
VPS41-211ENST00000466017 MAB21L2Q9Y586 359 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 NUBP2Q9Y5Y2 271 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 DSCAMO60469 2012 aa4.55□□□□□ -1.68
VPS41-211ENST00000466017 PRRC2CQ9Y520 2896 aaKnown RBP4.55□□□□□ -1.68
VPS41-211ENST00000466017 TANC2Q9HCD6 1990 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 ANKHD1Q8IWZ3 2542 aaKnown RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 TMEM30CPA0ZSE6 113 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 GAGE12BA1L429 117 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 GAGE12HA6NDE8 117 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 TRDCB7Z8K6 153 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 DIRC3C9JPN6 131 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 NPIPB11E5RHQ5 1161 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 ITGB1BP1O14713 200 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 WNT9BO14905 357 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 NDUFB6O95139 128 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 CYB5R3P00387 301 aaPredicted RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 IGHV2-70P01814 119 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 TK1P04183 234 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 CD3DP04234 171 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 TCRBP04435 133 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 IFNA6P05013 189 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 IL5P05113 134 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 HEXAP06865 529 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 COL8A2P25067 703 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 GIFP27352 417 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 DUSP1P28562 367 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 SSTR2P30874 369 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 BTCP35070 178 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 OR3A1P47881 315 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 OR3A3P47888 321 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 NPY4RP50391 375 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 SEC61A1P61619 476 aaKnown RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 MEF2CQ06413 473 aaPredicted RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 RBMS2Q15434 407 aaKnown RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 SURF2Q15527 256 aaPredicted RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 HMGN3Q15651 99 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 TRIM16LQ309B1 348 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 RNASE10Q5GAN6 216 aaKnown RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 ZNF660Q6AZW8 331 aaPredicted RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 PLET1Q6UQ28 207 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 BTN2A1Q7KYR7 527 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 NRARPQ7Z6K4 114 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 PEG10Q86TG7 708 aaKnown RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 LHFPL1Q86WI0 220 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 TMEM17Q86X19 198 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 ZCCHC24Q8N2G6 241 aaKnown RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 MUC20Q8N307 709 aaPredicted RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 BPIFB2Q8N4F0 458 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 GVQW1Q8N7I0 195 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 ZDHHC22Q8N966 263 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 ZNF565Q8N9K5 539 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 OR4S1Q8NGB4 309 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 OR10A7Q8NGE5 316 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 OR4C16Q8NGL9 310 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 OR4A4PQ8NGN8 299 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 OR6F1Q8NGZ6 308 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 OR56B4Q8NH76 319 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 TERB2Q8NHR7 220 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 MRPL30Q8TCC3 161 aaKnown RBP4.54□□□□□ -1.68
VPS41-211ENST00000466017 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 CCL17Q92583 94 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 RAB1CQ92928 201 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 SNAPC3Q92966 411 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 CREB3L1Q96BA8 519 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 GAFA1Q96PS6 74 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 PRRT1Q99946 306 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 CABLES2Q9BTV7 478 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 ST6GALNAC5Q9BVH7 336 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 CACNG6Q9BXT2 260 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 TAS2R3Q9NYW6 316 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 OR6C3Q9NZP0 311 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 ZNF581Q9P0T4 197 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 IL36RNQ9UBH0 155 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 LPAR3Q9UBY5 353 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 MIOXQ9UGB7 285 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 GAB2Q9UQC2 676 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 LAMP3Q9UQV4 416 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 CACNA1DQ01668 2161 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 ROS1P08922 2347 aa4.54□□□□□ -1.68
VPS41-211ENST00000466017 KMT2BQ9UMN6 2715 aaPredicted RBP4.53□□□□□ -1.68
VPS41-211ENST00000466017 IGSF10Q6WRI0 2623 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 IGKV1D-8A0A087WSZ0 117 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 TRBV6-7A0A0A0MS04 114 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 INMT-MINDY4F8WBC2 141 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 NDUFS8O00217 210 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 SIRPB1O00241 398 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 FABP7O15540 132 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 PRAF2O60831 178 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 TUSC2O75896 110 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 WNT2P09544 360 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 DAOP14920 347 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 HLA-DMAP28067 261 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 CD80P33681 288 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 HRH1P35367 487 aa4.53□□□□□ -1.68
VPS41-211ENST00000466017 GLP1RP43220 463 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms