RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	CAT	P04040	527 aa	Known RBP	3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	CRHBP	P24387	322 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	F2R	P25116	425 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	AK4	P27144	223 aa	Predicted RBP	3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	HTR2A	P28223	471 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	RPL4	P36578	427 aa	Known RBP	3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	CRYBA4	P53673	196 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	RPS27A	P62979	156 aa	Known RBP	3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	PAX8	Q06710	450 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	ZNF616	Q08AN1	781 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	FZD2	Q14332	565 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	NSDHL	Q15738	373 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	ZNF404	Q494X3	552 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	CCSMST1	Q4G0I0	132 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	PYY3	Q5JQD4	70 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	GLYAT	Q6IB77	296 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	AGTRAP	Q6RW13	159 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	ATRAID	Q6UW56	229 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	SLC36A1	Q7Z2H8	476 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	OAF	Q86UD1	273 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	PARG	Q86W56	976 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	C17orf82	Q86X59	251 aa	Predicted RBP	3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	TRAPPC5	Q8IUR0	188 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	SERPINA12	Q8IW75	414 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	LGI3	Q8N145	548 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	ZADH2	Q8N4Q0	377 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	FAM71C	Q8NEG0	241 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	OR4A15	Q8NGL6	344 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	OR8D4	Q8NGM9	314 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	OR10R2	Q8NGX6	335 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	OR2T4	Q8NH00	348 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	NUBPL	Q8TB37	319 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	MRAP	Q8TCY5	172 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	RNASEH2C	Q8TDP1	164 aa	Known RBP	3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	CASTOR1	Q8WTX7	329 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	CYGB	Q8WWM9	190 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	ROPN1L	Q96C74	230 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	CXorf58	Q96LI9	332 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	RDH12	Q96NR8	316 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	ERMAP	Q96PL5	475 aa	Predicted RBP	3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	RBP7	Q96R05	134 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	CMSS1	Q9BQ75	279 aa	Known RBP	3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	RSG1	Q9BU20	258 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	SLIRP	Q9GZT3	109 aa	Known RBP	3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	NOX3	Q9HBY0	568 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	APMAP	Q9HDC9	416 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	AIG1	Q9NVV5	245 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	OPTC	Q9UBM4	332 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	FBXL3	Q9UKT7	428 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	POMP	Q9Y244	141 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	SLC35A3	Q9Y2D2	325 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	CSAG2	Q9Y5P2	127 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	MALRD1	Q5VYJ5	2156 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	CCDC88C	Q9P219	2028 aa		3.97	□□□□□ -1.77
CACNA1C-223	ENST00000465278	MED12	Q93074	2177 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	IGHV3OR16-10	A0A075B7F0	116 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278		A0A087WUJ7	227 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	TRAV39	A0A0B4J263	110 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	NKX2-6	A6NCS4	301 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR5H15	A6NDH6	313 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	FAM74A7	A6NL05	159 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	BBIP1	A8MTZ0	92 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	FXYD1	O00168	92 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MANBA	O00462	879 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MYL12B	O14950	172 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SLC19A2	O60779	497 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	SH3BGRL	O75368	114 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	TOX	O94900	526 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	BRI3	O95415	125 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	C1QC	P02747	245 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	CD5	P06127	495 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	GPX2	P18283	190 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MYL12A	P19105	171 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MYL9	P24844	172 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MAP2K4	P45985	399 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	RRAS2	P62070	204 aa	Predicted RBP	3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	HBA1	P69905	142 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	FAM3A	P98173	230 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	AES	Q08117	197 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	PDE7A	Q13946	482 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	PLPPR5	Q32ZL2	321 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	FAM74A3	Q4VXF1	159 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	GCSAML	Q5JQS6	135 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	COL5A1-AS1	Q5SY13	56 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	FAM219B	Q5XKK7	198 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	CASP12	Q6UXS9	341 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	LANCL3	Q6ZV70	420 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ZNF546	Q86UE3	836 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	RIMKLA	Q8IXN7	391 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	PDZD9	Q8IXQ8	264 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	ABHD12	Q8N2K0	398 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	MS4A15	Q8N5U1	240 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	DUSP18	Q8NEJ0	188 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	PROKR2	Q8NFJ6	384 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR4E2	Q8NGC2	313 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR4D6	Q8NGJ1	314 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR13C8	Q8NGS7	320 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR4Q3	Q8NH05	313 aa		3.96	□□□□□ -1.78
CACNA1C-223	ENST00000465278	OR5AK3P	Q8NH89	298 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms