RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 RIDAP52758 137 aaKnown RBP11.42□□□□□ -0.58
HDAC6-214ENST00000465269 CXCR4P61073 352 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 ZNF829Q3KNS6 432 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-214ENST00000465269 C6orf141Q5SZD1 244 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 ANKRD13BQ86YJ7 626 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 ELMOD2Q8IZ81 293 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 TMEM104Q8NE00 496 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 Q9H521 79 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 PLEKHA3Q9HB20 300 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 HMG20AQ9NP66 347 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 PARP11Q9NR21 331 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 KIF25Q9UIL4 384 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 OR52A1Q9UKL2 312 aa11.42□□□□□ -0.58
HDAC6-214ENST00000465269 EXOGQ9Y2C4 368 aaKnown RBP11.42□□□□□ -0.58
HDAC6-214ENST00000465269 A0A1W2PQL4 384 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-214ENST00000465269 FUOMA2VDF0 154 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 SLC33A1O00400 549 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-214ENST00000465269 DENRO43583 198 aaKnown RBP11.41□□□□□ -0.58
HDAC6-214ENST00000465269 SOX15O60248 233 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 GAPDHP04406 335 aaKnown RBP11.41□□□□□ -0.58
HDAC6-214ENST00000465269 OR2T7P0C7T2 308 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 SSTR5P35346 364 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 FUT6P51993 359 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 EWSR1Q01844 656 aaKnown RBP eCLIP11.41□□□□□ -0.58
HDAC6-214ENST00000465269 ZNF816Q0VGE8 651 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-214ENST00000465269 Q6P435 159 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 SSX6Q7RTT6 188 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 ZNF679Q8IYX0 411 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 OR52I1Q8NGK6 324 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 UBALD1Q8TB05 177 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 MRGPRDQ8TDS7 321 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 GGHQ92820 318 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 BORCS8Q96FH0 119 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 OR6C3Q9NZP0 311 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 STUB1Q9UNE7 303 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 TMEM14AQ9Y6G1 99 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 DNAH11Q96DT5 4516 aa11.41□□□□□ -0.58
HDAC6-214ENST00000465269 DAPL1A0PJW8 107 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 IZUMO1RA6ND01 250 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 FAM90A10PA6NDY2 464 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 PTGES3LE9PB15 166 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 J3QRE1 110 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 MOSP00540 346 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 IL1AP01583 271 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 LGALS1P09382 135 aaKnown RBP11.4□□□□□ -0.58
HDAC6-214ENST00000465269 OR5H8P0DN80 308 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 ROM1Q03395 351 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 ZNF85Q03923 595 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 RAB40BQ12829 278 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 SPIN3Q5JUX0 258 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 DEGS2Q6QHC5 323 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 ZNF322Q6U7Q0 402 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-214ENST00000465269 LHFPL3Q86UP9 236 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 Q8IYB0 196 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 THAP7Q9BT49 309 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-214ENST00000465269 PLEKHA1Q9HB21 404 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 PLCXD1Q9NUJ7 323 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 MRPS18AQ9NVS2 196 aaKnown RBP11.4□□□□□ -0.58
HDAC6-214ENST00000465269 DNAH17Q9UFH2 4485 aa11.4□□□□□ -0.58
HDAC6-214ENST00000465269 MEIKINA0A087WXM9 373 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 FADS2O95864 444 aaKnown RBP11.39□□□□□ -0.59
HDAC6-214ENST00000465269 LINC00322Q6ZN03 302 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-214ENST00000465269 Q6ZSR3 168 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 AHSA2Q719I0 299 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 ACBD7Q8N6N7 88 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 OR5D18Q8NGL1 313 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 ASB17Q8WXJ9 295 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 SPACA5Q96QH8 159 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 CHCHD6Q9BRQ6 235 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 WFDC10AQ9H1F0 79 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 ZCCHC4Q9H5U6 513 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 FGF20Q9NP95 211 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-214ENST00000465269 SCN3BQ9NY72 215 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 PSORS1C1Q9UIG5 152 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 FBXO7Q9Y3I1 522 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 R4GMQ9 66 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 HERC1Q15751 4861 aa11.39□□□□□ -0.59
HDAC6-214ENST00000465269 IGKV1-9A0A0C4DH69 117 aa11.38□□□□□ -0.59
HDAC6-214ENST00000465269 ZNF254O75437 659 aa11.38□□□□□ -0.59
HDAC6-214ENST00000465269 RPP14O95059 124 aaKnown RBP11.38□□□□□ -0.59
HDAC6-214ENST00000465269 BLVRBP30043 206 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-214ENST00000465269 KIR3DL2P43630 455 aa11.38□□□□□ -0.59
HDAC6-214ENST00000465269 ST3GAL4Q11206 333 aa11.38□□□□□ -0.59
HDAC6-214ENST00000465269 MED21Q13503 144 aa11.38□□□□□ -0.59
HDAC6-214ENST00000465269 ECSCRQ19T08 205 aa11.38□□□□□ -0.59
HDAC6-214ENST00000465269 TP53I3Q53FA7 332 aa11.38□□□□□ -0.59
HDAC6-214ENST00000465269 YIPF7Q8N8F6 280 aa11.38□□□□□ -0.59
HDAC6-214ENST00000465269 RTN4IP1Q8WWV3 396 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-214ENST00000465269 TMEM80Q96HE8 168 aa11.38□□□□□ -0.59
HDAC6-214ENST00000465269 RITA1Q96K30 269 aa11.38□□□□□ -0.59
HDAC6-214ENST00000465269 MRM2Q9UI43 246 aaKnown RBP11.38□□□□□ -0.59
HDAC6-214ENST00000465269 LRRC42Q9Y546 428 aa11.38□□□□□ -0.59
HDAC6-214ENST00000465269 IRGMA1A4Y4 181 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 EFCAB10A6NFE3 127 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 J3QLW9 94 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 SLC31A2O15432 143 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 KRT8P05787 483 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 CSN2P05814 226 aa11.37□□□□□ -0.59
HDAC6-214ENST00000465269 ZNF19P17023 458 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms