RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 STUMQ69YW2 141 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 LIN54Q6MZP7 749 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 FIP1L1Q6UN15 594 aaKnown RBP14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 CLEC2AQ6UVW9 174 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 Q6ZS49 121 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 CD177Q8N6Q3 437 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 ADAD2Q8NCV1 583 aaKnown RBP14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 C10orf105Q8TEF2 133 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 C5orf66Q9H5L9 145 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 RCC2Q9P258 522 aaKnown RBP14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 OR14J1Q9UGF5 321 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 SHPKQ9UHJ6 478 aa14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 PRRC2AP48634 2157 aaKnown RBP14.11□□□□□ -0.15
EXOSC3-203ENST00000465229 CEBPDP49716 269 aaPredicted RBP14.1□□□□□ -0.15
EXOSC3-203ENST00000465229 IL13RA2Q14627 380 aa14.1□□□□□ -0.15
EXOSC3-203ENST00000465229 DCAF12L2Q5VW00 463 aa14.1□□□□□ -0.15
EXOSC3-203ENST00000465229 Q6P435 159 aa14.1□□□□□ -0.15
EXOSC3-203ENST00000465229 HDHD3Q9BSH5 251 aaPredicted RBP14.1□□□□□ -0.15
EXOSC3-203ENST00000465229 BPESC1Q9GZL8 116 aa14.1□□□□□ -0.15
EXOSC3-203ENST00000465229 SEBOXQ9HB31 216 aaPredicted RBP14.1□□□□□ -0.15
EXOSC3-203ENST00000465229 C12orf4Q9NQ89 552 aa14.1□□□□□ -0.15
EXOSC3-203ENST00000465229 NECAP2Q9NVZ3 263 aa14.1□□□□□ -0.15
EXOSC3-203ENST00000465229 IGKV1D-8A0A087WSZ0 117 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 DBX1A6NMT0 343 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 NDUFS8O00217 210 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 SH2D1BO14796 132 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 OR7C1O76099 320 aaPredicted RBP14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 SIX6O95475 246 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 HAND1O96004 215 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 GLAP06280 429 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 NPY4RP50391 375 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 DSCR9P59020 149 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 FGL1Q08830 312 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 CLEC12BQ2HXU8 276 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 ZNF660Q6AZW8 331 aaPredicted RBP14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 DHRS11Q6UWP2 260 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 MAFIPQ8WZ33 124 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 RTBDNQ9BSG5 229 aaPredicted RBP14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 ZNF286AQ9HBT8 521 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 SPACA1Q9HBV2 294 aa14.09□□□□□ -0.15
EXOSC3-203ENST00000465229 IGHV4-30-2A0A087WSY4 118 aa14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 SDCBPO00560 298 aaPredicted RBP14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 DEGS1O15121 323 aa14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 OR2H2O95918 312 aa14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 AKR1C4P17516 323 aa14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 NFYAP23511 347 aaPredicted RBP14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 GABRA2P47869 451 aa14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 IKZF1Q13422 519 aa14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 CCL13Q99616 98 aa14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 IFT22Q9H7X7 185 aa14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 HEXA-AS1Q9H8Q6 139 aa14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 GLS2Q9UI32 602 aa14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 METRNQ9UJH8 293 aa14.08□□□□□ -0.15
EXOSC3-203ENST00000465229 OR5H14A6NHG9 310 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 VWC2LB2RUY7 222 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 NDUFA2O43678 99 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 SFT2D2O95562 160 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 OR5H8P0DN80 308 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 LMO1P25800 156 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 SEC61A1P61619 476 aaKnown RBP14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 TMEM155Q4W5P6 130 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 PRSS57Q6UWY2 283 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 LYPD2Q6UXB3 125 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 ZNF788Q6ZQV5 615 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 KRTAP1-3Q8IUG1 177 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 TMEM230Q96A57 120 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 SDSLQ96GA7 329 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 PIMREGQ9BSJ6 248 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 SLC23A1Q9UHI7 598 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 MAB21L2Q9Y586 359 aa14.08□□□□□ -0.16
EXOSC3-203ENST00000465229 MYO9AB2RTY4 2548 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 TRAV24A0A0B4J272 114 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 A0A1B0GW55 424 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 POM121CA8CG34 1229 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 MCRIP1C9JLW8 97 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 DUX4L2P0CJ85 424 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 DUX4L3P0CJ86 424 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 DUX4L4P0CJ87 422 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 DUX4L5P0CJ88 424 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 DUX4L6P0CJ89 424 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 DUX4L7P0CJ90 424 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 ZNF44P15621 663 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 VAMP1P23763 118 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 COL10A1Q03692 680 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 Q5PR19 223 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 DUX4L9Q6RFH8 374 aaPredicted RBP14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 WDR89Q96FK6 387 aaPredicted RBP14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 GAFA1Q96PS6 74 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 DNTTIP1Q9H147 329 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 RIMS4Q9H426 269 aaPredicted RBP14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 NARFLQ9H6Q4 476 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 KAAG1Q9UBP8 84 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 DUX4Q9UBX2 424 aa14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 C14orf166Q9Y224 244 aaKnown RBP14.07□□□□□ -0.16
EXOSC3-203ENST00000465229 MALRD1Q5VYJ5 2156 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 SIRPB1O00241 398 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 TMPRSS2O15393 492 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 PSPNO60542 156 aa14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 CTSDP07339 412 aaPredicted RBP14.06□□□□□ -0.16
EXOSC3-203ENST00000465229 TMEM65Q6PI78 240 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms