RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 PFN2P35080 140 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 AKR1C3P42330 323 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TTPAP49638 278 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 XKP51811 444 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 CLDN18P56856 261 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 DNAJB13P59910 316 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 UBE2MP61081 183 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 EIF5AP63241 154 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 BTN3A2P78410 334 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 CRADDP78560 199 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 FAM3AP98173 230 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 CDK5Q00535 292 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TSNQ15631 228 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 MAPK14Q16539 360 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 MPV17L2Q567V2 206 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 GCSAMLQ5JQS6 135 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 STEAP4Q687X5 459 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 H3F3CQ6NXT2 135 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 HAGHLQ6PII5 290 aaPredicted RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 SMARCD3Q6STE5 483 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 RASSF6Q6ZTQ3 369 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM144Q7Z5S9 345 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 UNC93AQ86WB7 457 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 LRRC28Q86X40 367 aaPredicted RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 RAB43Q86YS6 212 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 VKORC1L1Q8N0U8 176 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 C9orf62Q8N4C0 152 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 ARRDC1Q8N5I2 433 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 FBXO36Q8NEA4 188 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 OR11H1Q8NG94 326 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 OR11H2Q8NH07 326 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 DCAKDQ8WVC6 231 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 SKA2Q8WVK7 121 aaPredicted RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 ASB17Q8WXJ9 295 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 CMTM5Q96DZ9 223 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 RBMXL1Q96E39 390 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 OR10C1Q96KK4 312 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 BTN2A3PQ96KV6 586 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 ZNF488Q96MN9 340 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM56Q96MV1 263 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 PRAP1Q96NZ9 151 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 GPR21Q99679 349 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 FOXC2Q99958 501 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 OR52D1Q9H346 318 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 C1orf198Q9H425 327 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM27Q9HBJ8 222 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 C14orf105Q9NVL8 296 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 FBXL3Q9UKT7 428 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 RBM7Q9Y580 266 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 PCYT1BQ9Y5K3 369 aaPredicted RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM56-RWDD3S4R434 201 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 V9GYS6 101 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 TMEM2Q9UHN6 1383 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 ADGRL2O95490 1459 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 NKTRP30414 1462 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 GRIN2BQ13224 1484 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 MAGI2Q86UL8 1455 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 CFAP74Q9C0B2 1584 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 CAMTA1Q9Y6Y1 1673 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 YLPM1P49750 1951 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 LAMC1P11047 1609 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 SLIT3O75094 1523 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 GPATCH8Q9UKJ3 1502 aaKnown RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 RGS12O14924 1447 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 NPHP4O75161 1426 aaPredicted RBP2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 SSH2Q76I76 1423 aa2.17□□□□□ -2.06
HMGXB4-205ENST00000464480 MED14O60244 1454 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 PLA2R1Q13018 1463 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 MLH3Q9UHC1 1453 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 TGIF2-C20orf24A0A0A6YYL0 155 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 A0A0J9YXV3 536 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 SLC17A3O00476 420 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 FAAHO00519 579 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 PLPP1O14494 284 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 SOCS1O15524 211 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 XRCC2O43543 280 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 ZNF207O43670 478 aaKnown RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 TCF21O43680 179 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 MRPS14O60783 128 aaKnown RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 UPK1BO75841 260 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 HLA-DQA1P01909 254 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 BPGMP07738 259 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 OR8U9P0C7N5 309 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 ZNF688P0C7X2 276 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 LINC00869P0C866 280 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 CD37P11049 281 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 HLA-GP17693 338 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 FGF7P21781 194 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 USF1P22415 310 aaPredicted RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 MYL9P24844 172 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 CD82P27701 267 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 CASP1P29466 404 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 IFNGR2P38484 337 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 OPRK1P41145 380 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 CD200P41217 278 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 FABP6P51161 128 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 CRYBA4P53673 196 aa2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 RPS15AP62244 130 aaKnown RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 LSM6P62312 80 aaKnown RBP2.16□□□□□ -2.06
HMGXB4-205ENST00000464480 GNA12Q03113 381 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms