RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 RCC2Q9P258 522 aaKnown RBP5.79□□□□□ -1.48
PTPRF-210ENST00000463041 TRAPPC2LQ9UL33 140 aa5.79□□□□□ -1.48
PTPRF-210ENST00000463041 LRRC42Q9Y546 428 aa5.79□□□□□ -1.48
PTPRF-210ENST00000463041 PEX16Q9Y5Y5 336 aa5.79□□□□□ -1.48
PTPRF-210ENST00000463041 IGHV1-3A0A0C4DH29 117 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 PNMA8CA0A1B0GUJ8 204 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 A0A1W2PPE3 182 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 MAGEA13PA6NCF6 341 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 PTGES3LE9PB15 166 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 CRTAPO75718 401 aaPredicted RBP5.78□□□□□ -1.48
PTPRF-210ENST00000463041 SC5DO75845 299 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 IGHG2P01859 326 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 CDK1P06493 297 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 UBBP0CG47 229 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 PF4V1P10720 104 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 CD37P11049 281 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 MGMTP16455 207 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 CD33P20138 364 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 CD1BP29016 333 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 DIAPH2-AS1Q14236 149 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 HNF4GQ14541 408 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 OXLD1Q5BKU9 147 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 TCTEX1D4Q5JR98 221 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 SYT6Q5T7P8 510 aaPredicted RBP5.78□□□□□ -1.48
PTPRF-210ENST00000463041 RAB12Q6IQ22 244 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 ZNF554Q86TJ5 538 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 C5orf56Q8N8D9 126 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 OR2T10Q8NGZ9 312 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 CHPT1Q8WUD6 406 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 SGCDQ92629 289 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 ST6GALNAC6Q969X2 333 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 EAF1Q96JC9 268 aaPredicted RBP5.78□□□□□ -1.48
PTPRF-210ENST00000463041 MND1Q9BWT6 205 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 SELENOIQ9C0D9 397 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 BANF2Q9H503 90 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 ZFP57Q9NU63 452 aa5.78□□□□□ -1.48
PTPRF-210ENST00000463041 A0A1W2PRX2 142 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 PSMB11A5LHX3 300 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 SH2D7A6NKC9 451 aaPredicted RBP5.77□□□□□ -1.49
PTPRF-210ENST00000463041 NCBP2LA6PVI3 153 aaKnown RBP5.77□□□□□ -1.49
PTPRF-210ENST00000463041 C12orf77C9JDV5 145 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 HSD17B6O14756 317 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 TXNL1O43396 289 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 PDCD6O75340 191 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 DUS4LO95620 317 aaKnown RBP5.77□□□□□ -1.49
PTPRF-210ENST00000463041 IGKV1D-33P01593 117 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 IGKV1-33P01594 117 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 HBZP02008 142 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 SRMP19623 302 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 SLC6A1P30531 599 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 RANBP1P43487 201 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 ZNF137PP52743 207 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 SLC35B1P78383 322 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 GABPB1Q06547 395 aaPredicted RBP5.77□□□□□ -1.49
PTPRF-210ENST00000463041 SPHARQ15513 63 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 MORN2Q502X0 79 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 CT45A1Q5HYN5 189 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 LY6G6FQ5SQ64 297 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 C1orf100Q5SVJ3 147 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 GLT8D1Q68CQ7 371 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 SIGIRRQ6IA17 410 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 SLC25A48Q6ZT89 311 aaKnown RBP5.77□□□□□ -1.49
PTPRF-210ENST00000463041 TGIF2LXQ8IUE1 241 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 COMMD1Q8N668 190 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 TMEM104Q8NE00 496 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 OR8H1Q8NGG4 311 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 OR4K15Q8NH41 348 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 CT45A3Q8NHU0 189 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 RTN4IP1Q8WWV3 396 aaPredicted RBP5.77□□□□□ -1.49
PTPRF-210ENST00000463041 PHYHIPQ92561 330 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 Q96M66 194 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 GON7Q9BXV9 100 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 CST11Q9H112 138 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 MBNL3Q9NUK0 354 aaKnown RBP5.77□□□□□ -1.49
PTPRF-210ENST00000463041 NECAP2Q9NVZ3 263 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 KCNIP1Q9NZI2 227 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 GNG12Q9UBI6 72 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 TPRKBQ9Y3C4 175 aa5.77□□□□□ -1.49
PTPRF-210ENST00000463041 IGHV3-43A0A0B4J1X8 118 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 UBE2QL1A1L167 161 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 SERPINE3A8MV23 424 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 LANCL1O43813 399 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 YPEL1O60688 119 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 MOSP00540 346 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 PF4P02776 101 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 IGHV3-43DP0DP04 118 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 RCC1P18754 421 aaPredicted RBP5.76□□□□□ -1.49
PTPRF-210ENST00000463041 VHLP40337 213 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 REG1BP48304 166 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 ZNF134P52741 427 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 GP2P55259 537 aaKnown RBP5.76□□□□□ -1.49
PTPRF-210ENST00000463041 SLC35A2P78381 396 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 HTD2P86397 168 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 TPBGQ13641 420 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 IRF3Q14653 427 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 TRAM1Q15629 374 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 C10orf99Q6UWK7 81 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 CEACAM19Q7Z692 300 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 SLC35E3Q7Z769 313 aa5.76□□□□□ -1.49
PTPRF-210ENST00000463041 ZNF329Q86UD4 541 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms