RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CCDC22O60826 627 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 RGS11O94810 467 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 APOL3O95236 402 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 MT-ND2P03891 347 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 HSPB1P04792 205 aaKnown RBP5.85□□□□□ -1.47
SMC3-202ENST00000462899 C21orf33P30042 268 aaPredicted RBP5.85□□□□□ -1.47
SMC3-202ENST00000462899 BLVRBP30043 206 aaPredicted RBP5.85□□□□□ -1.47
SMC3-202ENST00000462899 BNIP1Q12981 228 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 LSAMPQ13449 338 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 LTC4SQ16873 150 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 TMEM236Q5W0B7 351 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 ELP2Q6IA86 826 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 CYP2R1Q6VVX0 501 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 SLC25A48Q6ZT89 311 aaKnown RBP5.85□□□□□ -1.47
SMC3-202ENST00000462899 GIPC3Q8TF64 312 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 RFT1Q96AA3 541 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 CMTM5Q96DZ9 223 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 RITA1Q96K30 269 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 OPALINQ96PE5 141 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 KRTAP9-2Q9BYQ4 174 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 FAM53CQ9NYF3 392 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 CEPT1Q9Y6K0 416 aa5.85□□□□□ -1.47
SMC3-202ENST00000462899 TRAV39A0A0B4J263 110 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 HSPB6O14558 160 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 DEGS1O15121 323 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 ARPC1BO15143 372 aaKnown RBP5.84□□□□□ -1.47
SMC3-202ENST00000462899 SLC25A17O43808 307 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 PRKYO43930 277 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 RPP14O95059 124 aaKnown RBP5.84□□□□□ -1.47
SMC3-202ENST00000462899 NDUFA3O95167 84 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 BRI3O95415 125 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 SERPINA3P01011 423 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 UBCP0CG48 685 aaKnown RBP5.84□□□□□ -1.47
SMC3-202ENST00000462899 EGR2P11161 476 aaPredicted RBP5.84□□□□□ -1.47
SMC3-202ENST00000462899 PRKACBP22694 351 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 KCNJ3P48549 501 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 MECP2P51608 486 aaKnown RBP5.84□□□□□ -1.47
SMC3-202ENST00000462899 ZNF134P52741 427 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 ACTR3P61158 418 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 SCN1BQ07699 218 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 RAB40BQ12829 278 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 SPATS1Q496A3 300 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 AADACL4Q5VUY2 407 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 BCDIN3DQ7Z5W3 292 aaKnown RBP5.84□□□□□ -1.47
SMC3-202ENST00000462899 RDH10Q8IZV5 341 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 OR5D18Q8NGL1 313 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 CNIH3Q8TBE1 160 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 CASTOR1Q8WTX7 329 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 ELAC2Q9BQ52 826 aaKnown RBP5.84□□□□□ -1.47
SMC3-202ENST00000462899 PARP11Q9NR21 331 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 ZNF581Q9P0T4 197 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 MYRFQ9Y2G1 1151 aa5.84□□□□□ -1.47
SMC3-202ENST00000462899 IZUMO1RA6ND01 250 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.83□□□□□ -1.48
SMC3-202ENST00000462899 ZNF670-ZNF695F2Z2N8 137 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 DEDDO75618 318 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 SULT1C4O75897 302 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 ISG15P05161 165 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 ACTBP60709 375 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 KLF5Q13887 457 aaPredicted RBP5.83□□□□□ -1.48
SMC3-202ENST00000462899 IL13RA2Q14627 380 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 MMDQ15546 238 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 C5orf64Q2M2E5 130 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 PAN3Q58A45 887 aaKnown RBP5.83□□□□□ -1.48
SMC3-202ENST00000462899 NXNL2Q5VZ03 156 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 CD200R1LQ6Q8B3 271 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 ANKRD13BQ86YJ7 626 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 HS3ST5Q8IZT8 346 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 TCTEX1D1Q8N7M0 179 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 BVESQ8NE79 360 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 NPBQ8NG41 125 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 FLYWCH2Q96CP2 140 aaKnown RBP5.83□□□□□ -1.48
SMC3-202ENST00000462899 ST6GALNAC5Q9BVH7 336 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 ELOVL1Q9BW60 279 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 ANKRD60Q9BZ19 345 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 BARHL1Q9BZE3 327 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 IFT22Q9H7X7 185 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 SIGLEC8Q9NYZ4 499 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 FOXA2Q9Y261 457 aaPredicted RBP5.83□□□□□ -1.48
SMC3-202ENST00000462899 NUBP2Q9Y5Y2 271 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 LRP1BQ9NZR2 4599 aa5.83□□□□□ -1.48
SMC3-202ENST00000462899 IGHV3-43A0A0B4J1X8 118 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 A0A1W2PN81 502 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 A0A1W2PQL4 384 aaPredicted RBP5.82□□□□□ -1.48
SMC3-202ENST00000462899 NUPR2A6NF83 97 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 METTL15A6NJ78 407 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 H0Y980 276 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 M0R129 80 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 NBR2O15453 112 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 LANCL1O43813 399 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 ORC5O43913 435 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 IGHV3-11P01762 117 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 KRT8P05787 483 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 IGHV3-43DP0DP04 118 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 IL3RAP26951 378 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 CHRNA7P36544 502 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 EWSR1Q01844 656 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMC3-202ENST00000462899 ECSCRQ19T08 205 aa5.82□□□□□ -1.48
SMC3-202ENST00000462899 CT45A1Q5HYN5 189 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms