RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 IFNA4P05014 189 aa12.21□□□□□ -0.45
HDAC6-213ENST00000462730 CEBPDP49716 269 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-213ENST00000462730 UCP3P55916 312 aa12.21□□□□□ -0.45
HDAC6-213ENST00000462730 RPS23P62266 143 aaKnown RBP12.21□□□□□ -0.45
HDAC6-213ENST00000462730 HLA-DRB3P79483 266 aa12.21□□□□□ -0.45
HDAC6-213ENST00000462730 HOXA4Q00056 320 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-213ENST00000462730 HERPUD1Q15011 391 aa12.21□□□□□ -0.45
HDAC6-213ENST00000462730 PHLDA2Q53GA4 152 aa12.21□□□□□ -0.45
HDAC6-213ENST00000462730 ZNF880Q6PDB4 577 aa12.21□□□□□ -0.45
HDAC6-213ENST00000462730 OR1S2Q8NGQ3 325 aa12.21□□□□□ -0.45
HDAC6-213ENST00000462730 BIN3Q9NQY0 253 aa12.21□□□□□ -0.45
HDAC6-213ENST00000462730 C1orf123Q9NWV4 160 aa12.21□□□□□ -0.45
HDAC6-213ENST00000462730 ATG12O94817 140 aa12.21□□□□□ -0.46
HDAC6-213ENST00000462730 DIRAS3O95661 229 aa12.21□□□□□ -0.46
HDAC6-213ENST00000462730 THBDP07204 575 aa12.21□□□□□ -0.46
HDAC6-213ENST00000462730 ASCL1P50553 236 aa12.21□□□□□ -0.46
HDAC6-213ENST00000462730 TMEM108Q6UXF1 575 aa12.21□□□□□ -0.46
HDAC6-213ENST00000462730 ACP7Q6ZNF0 438 aa12.21□□□□□ -0.46
HDAC6-213ENST00000462730 BOLLQ8N9W6 283 aaKnown RBP12.21□□□□□ -0.46
HDAC6-213ENST00000462730 TMEM171Q8WVE6 324 aa12.21□□□□□ -0.46
HDAC6-213ENST00000462730 RSRP1Q9BUV0 290 aa12.21□□□□□ -0.46
HDAC6-213ENST00000462730 NAA60Q9H7X0 242 aa12.21□□□□□ -0.46
HDAC6-213ENST00000462730 IGKV1-6A0A0C4DH72 117 aa12.2□□□□□ -0.46
HDAC6-213ENST00000462730 FAM90A27PA6NNH2 459 aa12.2□□□□□ -0.46
HDAC6-213ENST00000462730 ATXN7O15265 892 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-213ENST00000462730 CTXN2P0C2S0 81 aa12.2□□□□□ -0.46
HDAC6-213ENST00000462730 RCC1P18754 421 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-213ENST00000462730 CHRNB4P30926 498 aa12.2□□□□□ -0.46
HDAC6-213ENST00000462730 CD200P41217 278 aa12.2□□□□□ -0.46
HDAC6-213ENST00000462730 ZNF497Q6ZNH5 498 aa12.2□□□□□ -0.46
HDAC6-213ENST00000462730 SPAG16Q8N0X2 631 aa12.2□□□□□ -0.46
HDAC6-213ENST00000462730 STOML3Q8TAV4 291 aa12.2□□□□□ -0.46
HDAC6-213ENST00000462730 METTL8Q9H825 291 aaKnown RBP12.2□□□□□ -0.46
HDAC6-213ENST00000462730 SLC2A9Q9NRM0 540 aa12.2□□□□□ -0.46
HDAC6-213ENST00000462730 CADP27708 2225 aa12.2□□□□□ -0.46
HDAC6-213ENST00000462730 TRAV39A0A0B4J263 110 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 H7C1Q1 480 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 KCNAB3O43448 404 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 HOXB5P09067 269 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 PSMB6P28072 239 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 ADORA2A-AS1P86434 159 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 MOB1BQ7L9L4 216 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 OR4A4PQ8NGN8 299 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 OR11L1Q8NGX0 322 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 LRRC29Q8WV35 223 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 RTN4IP1Q8WWV3 396 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-213ENST00000462730 NMES1Q9C002 83 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 TREM2Q9NZC2 230 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 TAAR3PQ9P1P4 343 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 MLXQ9UH92 298 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 TPRP12270 2363 aaKnown RBP12.19□□□□□ -0.46
HDAC6-213ENST00000462730 IGLV3-9A0A075B6K5 115 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 TMEM218A2RU14 115 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 FGF16O43320 207 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 PTAFRP25105 342 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 SMIM21Q3B7S5 101 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 CCDC71LQ8N9Z2 235 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 SECTM1Q8WVN6 248 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 TSNAXQ99598 290 aaKnown RBP12.19□□□□□ -0.46
HDAC6-213ENST00000462730 MRPL37Q9BZE1 423 aaKnown RBP12.19□□□□□ -0.46
HDAC6-213ENST00000462730 ADGRG4Q8IZF6 3080 aa12.19□□□□□ -0.46
HDAC6-213ENST00000462730 COL6A6A6NMZ7 2263 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 GPR31O00270 319 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 SPRY3O43610 288 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 TUSC2O75896 110 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 TFF1P04155 84 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 OR5AC1P0C628 307 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 CYCSP99999 105 aaKnown RBP12.18□□□□□ -0.46
HDAC6-213ENST00000462730 BSPH1Q075Z2 132 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 ZNF565Q8N9K5 539 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 DCUN1D4Q92564 292 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 WFIKKN1Q96NZ8 548 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 CABLES2Q9BTV7 478 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 TRAPPC2LQ9UL33 140 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 KCNIP3Q9Y2W7 256 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 TRBV6-7A0A0A0MS04 114 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 IGKV1D-13A0A0B4J2D9 117 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 NKX2-6A6NCS4 301 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 DPRXA6NFQ7 191 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 PSPNO60542 156 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 PTBP3O95758 552 aaKnown RBP12.18□□□□□ -0.46
HDAC6-213ENST00000462730 IGKV1-13P0DP09 117 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 TPT1P13693 172 aaKnown RBP12.18□□□□□ -0.46
HDAC6-213ENST00000462730 ADCYAP1P18509 176 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 AKR1C2P52895 323 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 SELENOVP59797 346 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 AKR1C1Q04828 323 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 TMEM187Q14656 261 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 SP6Q3SY56 376 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 PUSL1Q8N0Z8 303 aaKnown RBP12.18□□□□□ -0.46
HDAC6-213ENST00000462730 GAPTQ8N292 157 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 GALNT14Q96FL9 552 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 KIRREL1Q96J84 757 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 MEGF10Q96KG7 1140 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 OR10C1Q96KK4 312 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 C2orf50Q96LR7 162 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 OR2V2Q96R30 315 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 SLC5A7Q9GZV3 580 aa12.18□□□□□ -0.46
HDAC6-213ENST00000462730 CARHSP1Q9Y2V2 147 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms