RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 FSCN3Q9NQT6 498 aa15.75■□□□□ 0.11
HPS3-204ENST00000462030 TMEM242Q9NWH2 141 aa15.75■□□□□ 0.11
HPS3-204ENST00000462030 LRFN1Q9P244 771 aa15.75■□□□□ 0.11
HPS3-204ENST00000462030 KIAA2026Q5HYC2 2103 aa15.75■□□□□ 0.11
HPS3-204ENST00000462030 DNPH1O43598 174 aa15.74■□□□□ 0.11
HPS3-204ENST00000462030 RNF224P0DH78 156 aa15.74■□□□□ 0.11
HPS3-204ENST00000462030 CCL2P13500 99 aa15.74■□□□□ 0.11
HPS3-204ENST00000462030 WDR54Q9H977 334 aa15.74■□□□□ 0.11
HPS3-204ENST00000462030 OR14J1Q9UGF5 321 aa15.74■□□□□ 0.11
HPS3-204ENST00000462030 METTL15P1P0C7V9 234 aa15.74■□□□□ 0.11
HPS3-204ENST00000462030 DDTP30046 118 aa15.74■□□□□ 0.11
HPS3-204ENST00000462030 OR10D3Q8NH80 312 aa15.74■□□□□ 0.11
HPS3-204ENST00000462030 SCGB1C1Q8TD33 95 aa15.74■□□□□ 0.11
HPS3-204ENST00000462030 ABHD3Q8WU67 409 aa15.74■□□□□ 0.11
HPS3-204ENST00000462030 CABLES2Q9BTV7 478 aa15.74■□□□□ 0.11
HPS3-204ENST00000462030 CD55P08174 381 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 RFPL3SP0C7P2 107 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 PLA2G5P39877 138 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 PKIAP61925 76 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 ABLIM2Q6H8Q1 611 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 HAPLN4Q86UW8 402 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 RNASE11Q8TAA1 199 aaKnown RBP15.73■□□□□ 0.11
HPS3-204ENST00000462030 MRPL30Q8TCC3 161 aaKnown RBP15.73■□□□□ 0.11
HPS3-204ENST00000462030 PRDM14Q9GZV8 571 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 SMOC1Q9H4F8 434 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 UFSP2Q9NUQ7 469 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 FREM1Q5H8C1 2179 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 TNRC6BQ9UPQ9 1833 aaKnown RBP15.73■□□□□ 0.11
HPS3-204ENST00000462030 TRBV24-1A0A075B6N3 115 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 CEBPZOSA8MTT3 80 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 KLF7O75840 302 aaPredicted RBP15.73■□□□□ 0.11
HPS3-204ENST00000462030 CNOT4O95628 575 aaKnown RBP15.73■□□□□ 0.11
HPS3-204ENST00000462030 IL2RGP31785 369 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 REC114Q7Z4M0 266 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 ZNF525Q8N782 197 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 MBD3L1Q8WWY6 194 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 POM121Q96HA1 1249 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 RAB40CQ96S21 281 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 CACNG5Q9UF02 275 aa15.73■□□□□ 0.11
HPS3-204ENST00000462030 SYNGR1O43759 233 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 IGKV1-39P01597 117 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 IGKV1D-39P04432 117 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 SERPINE2P07093 398 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 EPHA8P29322 1005 aaPredicted RBP15.72■□□□□ 0.11
HPS3-204ENST00000462030 SRD5A2P31213 254 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 MLF1P58340 268 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 DNLZQ5SXM8 178 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 C9orf135Q5VTT2 229 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 SSX9Q7RTT3 188 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 GTF3AQ92664 365 aaKnown RBP15.72■□□□□ 0.11
HPS3-204ENST00000462030 ZNF845Q96IR2 970 aaPredicted RBP15.72■□□□□ 0.11
HPS3-204ENST00000462030 ZNF488Q96MN9 340 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 CDH20Q9HBT6 801 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 FREM2Q5SZK8 3169 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 CYC1P08574 325 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 CTXN2P0C2S0 81 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 WIPI1Q5MNZ9 446 aaPredicted RBP15.72■□□□□ 0.11
HPS3-204ENST00000462030 RIPPLY2Q5TAB7 128 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 ZNF324BQ6AW86 544 aaPredicted RBP15.72■□□□□ 0.11
HPS3-204ENST00000462030 COLCA1Q6ZS62 124 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 OR4X1Q8NH49 305 aa15.72■□□□□ 0.11
HPS3-204ENST00000462030 A0A087X0M5 115 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 A0A1B0GX30 115 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 SMCO3A2RU48 225 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 OPN1MWP04001 364 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 OPN1MW2P0DN77 364 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 OPN1MW3P0DN78 364 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 TLE1Q04724 770 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 CLN3Q13286 438 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 BEND4Q6ZU67 534 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 ADGRG7Q96K78 797 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 REPIN1Q9BWE0 567 aaKnown RBP15.71■□□□□ 0.11
HPS3-204ENST00000462030 RBKSQ9H477 322 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 ERRFI1Q9UJM3 462 aaPredicted RBP15.71■□□□□ 0.11
HPS3-204ENST00000462030 OR2W1Q9Y3N9 320 aa15.71■□□□□ 0.11
HPS3-204ENST00000462030 TRAPPC2LH3BP13 241 aa15.71■□□□□ 0.1
HPS3-204ENST00000462030 HS3ST1O14792 307 aa15.71■□□□□ 0.1
HPS3-204ENST00000462030 TGOLN2O43493 480 aa15.71■□□□□ 0.1
HPS3-204ENST00000462030 MDH2P40926 338 aaKnown RBP15.71■□□□□ 0.1
HPS3-204ENST00000462030 ELLP55199 621 aaPredicted RBP15.71■□□□□ 0.1
HPS3-204ENST00000462030 WDR25Q64LD2 544 aaPredicted RBP15.71■□□□□ 0.1
HPS3-204ENST00000462030 ZDHHC23Q8IYP9 409 aa15.71■□□□□ 0.1
HPS3-204ENST00000462030 KCNE4Q8WWG9 221 aa15.71■□□□□ 0.1
HPS3-204ENST00000462030 RDH5Q92781 318 aa15.71■□□□□ 0.1
HPS3-204ENST00000462030 PLK3Q9H4B4 646 aa15.71■□□□□ 0.1
HPS3-204ENST00000462030 PSENENQ9NZ42 101 aa15.71■□□□□ 0.1
HPS3-204ENST00000462030 A0A096LPE4 126 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 A0A1W2PPZ6 126 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 TSTD3H0UI37 97 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 SYNGR2O43760 224 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 FGF5P12034 268 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 IGFBP4P22692 258 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 AGBL5Q8NDL9 886 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 OR1K1Q8NGR3 316 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 CLDN23Q96B33 292 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 VAX2Q9UIW0 290 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 PITPNC1Q9UKF7 332 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 MAP1LC3B2A6NCE7 125 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 C9J4A7 227 aa15.7■□□□□ 0.1
HPS3-204ENST00000462030 TRAPPC6AO75865 159 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms