RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 CCDC107Q8WV48 283 aa13.97□□□□□ -0.17
MRPL28-207ENST00000461550 CYYR1Q96J86 154 aa13.97□□□□□ -0.17
MRPL28-207ENST00000461550 MMP28Q9H239 520 aa13.97□□□□□ -0.17
MRPL28-207ENST00000461550 NCOR1P1Q9H4R4 102 aa13.97□□□□□ -0.17
MRPL28-207ENST00000461550 BANF2Q9H503 90 aa13.97□□□□□ -0.17
MRPL28-207ENST00000461550 RNF167Q9H6Y7 350 aa13.97□□□□□ -0.17
MRPL28-207ENST00000461550 IFT22Q9H7X7 185 aa13.97□□□□□ -0.17
MRPL28-207ENST00000461550 A0A1W2PPE3 182 aa13.96□□□□□ -0.17
MRPL28-207ENST00000461550 LY6LH3BQJ8 138 aa13.96□□□□□ -0.17
MRPL28-207ENST00000461550 CD28P10747 220 aa13.96□□□□□ -0.17
MRPL28-207ENST00000461550 GALP22466 123 aa13.96□□□□□ -0.17
MRPL28-207ENST00000461550 BRS3P32247 399 aa13.96□□□□□ -0.17
MRPL28-207ENST00000461550 CEACAM3P40198 252 aa13.96□□□□□ -0.17
MRPL28-207ENST00000461550 PAX5Q02548 391 aa13.96□□□□□ -0.17
MRPL28-207ENST00000461550 MPV17LQ2QL34 196 aa13.96□□□□□ -0.17
MRPL28-207ENST00000461550 ZNF554Q86TJ5 538 aa13.96□□□□□ -0.17
MRPL28-207ENST00000461550 CDH26Q8IXH8 852 aa13.96□□□□□ -0.17
MRPL28-207ENST00000461550 NAA50Q9GZZ1 169 aaKnown RBP13.96□□□□□ -0.17
MRPL28-207ENST00000461550 PSG11Q9UQ72 335 aa13.96□□□□□ -0.17
MRPL28-207ENST00000461550 TGP01266 2768 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 TMEM30CPA0ZSE6 113 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 SMIM30A4D0T7 59 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 SH2D7A6NKC9 451 aaPredicted RBP13.95□□□□□ -0.18
MRPL28-207ENST00000461550 NPIPB11E5RHQ5 1161 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 J3QR06 171 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 ZNF780AO75290 641 aaPredicted RBP13.95□□□□□ -0.18
MRPL28-207ENST00000461550 FBXO24O75426 580 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 MYL9P24844 172 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 DIAPH2-AS1Q14236 149 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 FAM53AQ6NSI3 398 aaPredicted RBP13.95□□□□□ -0.18
MRPL28-207ENST00000461550 LINC00596Q86U02 117 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 CLVS1Q8IUQ0 354 aaPredicted RBP13.95□□□□□ -0.18
MRPL28-207ENST00000461550 TOMM40LQ969M1 308 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 RPEQ96AT9 228 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 UQCC2Q9BRT2 126 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 SLC25A33Q9BSK2 321 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 LINC00574Q9H8X3 128 aa13.95□□□□□ -0.18
MRPL28-207ENST00000461550 TRAV1-2A0A0B4J238 106 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 PEX14O75381 377 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 FGF9P31371 208 aaPredicted RBP13.94□□□□□ -0.18
MRPL28-207ENST00000461550 VDAC2P45880 294 aaPredicted RBP13.94□□□□□ -0.18
MRPL28-207ENST00000461550 ARHGDIBP52566 201 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 OR10A3P58181 314 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 LSM3P62310 102 aaKnown RBP13.94□□□□□ -0.18
MRPL28-207ENST00000461550 NSUN5P1Q3KNT7 163 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 C1orf100Q5SVJ3 147 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 Q6ZNX1 250 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 SLC16A12Q6ZSM3 486 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 ANKRD13BQ86YJ7 626 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 C1QL4Q86Z23 238 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 DTX3Q8N9I9 347 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 TMEM104Q8NE00 496 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 CREB3L1Q96BA8 519 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 CENPOQ9BU64 300 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 PCDHB16Q9NRJ7 776 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 V9GY05 133 aa13.94□□□□□ -0.18
MRPL28-207ENST00000461550 PDCD5O14737 125 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 AIREO43918 545 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 CRTAPO75718 401 aaPredicted RBP13.93□□□□□ -0.18
MRPL28-207ENST00000461550 HTR2CP28335 458 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 GPR176Q14439 515 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 ABCA11PQ4W5N1 156 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 ZNF497Q6ZNH5 498 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 OR56B4Q8NH76 319 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 CAPSLQ8WWF8 208 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 ARL11Q969Q4 196 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 FAM46BQ96A09 425 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 SELENOIQ9C0D9 397 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 KCNK15Q9H427 330 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 LIN7BQ9HAP6 207 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 AMMECR1Q9Y4X0 333 aaPredicted RBP13.93□□□□□ -0.18
MRPL28-207ENST00000461550 IGHV3-43A0A0B4J1X8 118 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 C15orf65H3BRN8 121 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 AIPO00170 330 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 LPLP06858 475 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 IGHV3-43DP0DP04 118 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 CD37P11049 281 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 MGMTP16455 207 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 RAB3BP20337 219 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 TGFBR1P36897 503 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 MNDAP41218 407 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 CLDN12P56749 244 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 P2RY14Q15391 338 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 TIMM50Q3ZCQ8 353 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 HES5Q5TA89 166 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 RAB12Q6IQ22 244 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 CCDC144NLQ6NUI1 221 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 WIPF2Q8TF74 440 aaPredicted RBP13.93□□□□□ -0.18
MRPL28-207ENST00000461550 KCTD7Q96MP8 289 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 RBM14Q96PK6 669 aaKnown RBP13.93□□□□□ -0.18
MRPL28-207ENST00000461550 OCSTAMPQ9BR26 566 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 WNT10AQ9GZT5 417 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 PALMDQ9NP74 551 aa13.93□□□□□ -0.18
MRPL28-207ENST00000461550 RCC2Q9P258 522 aaKnown RBP13.93□□□□□ -0.18
MRPL28-207ENST00000461550 A0A1W2PPI3 338 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 H3BUI4 141 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 SDCBPO00560 298 aaPredicted RBP13.92□□□□□ -0.18
MRPL28-207ENST00000461550 SLC22A1O15245 554 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 OR2F2O95006 317 aa13.92□□□□□ -0.18
MRPL28-207ENST00000461550 GABARAPO95166 117 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms