RNA–Protein interactions for RNA: ENST00000461520.5

USP54-208, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best)

Gene USP54, Length 1,212 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-208ENST00000461520 GLIPR1P48060 266 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 PRRX1P54821 245 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 AESQ08117 197 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 MRPL28Q13084 256 aaKnown RBP5.77□□□□□ -1.49
USP54-208ENST00000461520 HLA-DRB5Q30154 266 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 KRBOX4Q5JUW0 171 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 PRAMEF5Q5TYX0 476 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 CCDC144NLQ6NUI1 221 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 ZFP1Q6P2D0 407 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 SERPINA12Q8IW75 414 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 SYS1Q8N2H4 156 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 PARP16Q8N5Y8 322 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 WFDC9Q8NEX5 89 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 OR5AU1Q8NGC0 362 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 OR4D6Q8NGJ1 314 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 OR5D18Q8NGL1 313 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 OR5D14Q8NGL3 314 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 OR10AC1Q8NH08 325 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 HAVCR2Q8TDQ0 301 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 CAPSLQ8WWF8 208 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 PYDC1Q8WXC3 89 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 RFT1Q96AA3 541 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 LGALS12Q96DT0 336 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 CPNE2Q96FN4 548 aaPredicted RBP5.77□□□□□ -1.49
USP54-208ENST00000461520 Q96MT0 163 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 SPACA5Q96QH8 159 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 OR5M11Q96RB7 305 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 OR6C3Q9NZP0 311 aa5.77□□□□□ -1.49
USP54-208ENST00000461520 IGLV5-39A0A0G2JS06 123 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 TMEM212A6NML5 194 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 ZNF729A6NN14 1252 aaPredicted RBP5.76□□□□□ -1.49
USP54-208ENST00000461520 OOSP1A8MZH6 123 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 LY6LH3BQJ8 138 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 BUB1B-PAK6H3BSN5 160 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 SLC33A1O00400 549 aaPredicted RBP5.76□□□□□ -1.49
USP54-208ENST00000461520 TOR1AO14656 332 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 DEGS1O15121 323 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 SULT1B1O43704 296 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 OR2F2O95006 317 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 FADS2O95864 444 aaKnown RBP5.76□□□□□ -1.49
USP54-208ENST00000461520 HCKP08631 526 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 CCDC159P0C7I6 412 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 GABRB1P18505 474 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 MNDAP41218 407 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 ZP1P60852 638 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 SCN1BQ07699 218 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 RAB40BQ12829 278 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 CDK5R1Q15078 307 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 KISS1Q15726 138 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 C17orf58Q2M2W7 97 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 TMEM95Q3KNT9 176 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 ELP2Q6IA86 826 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 Q6P435 159 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 BAIAP2L2Q6UXY1 529 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 RNF144BQ7Z419 303 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 CENPVQ7Z7K6 275 aaPredicted RBP5.76□□□□□ -1.49
USP54-208ENST00000461520 LHFPL3Q86UP9 236 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 C10orf67Q8IYJ2 551 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 ZNF565Q8N9K5 539 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 PXT1Q8NFP0 134 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 OR51T1Q8NGJ9 327 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 OR5AK2Q8NH90 309 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 ABHD5Q8WTS1 349 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 COQ2Q96H96 371 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 RBM14Q96PK6 669 aaKnown RBP5.76□□□□□ -1.49
USP54-208ENST00000461520 SLC25A33Q9BSK2 321 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 NCOR1P1Q9H4R4 102 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 ZNF286AQ9HBT8 521 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 INPP5EQ9NRR6 644 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 NECAP2Q9NVZ3 263 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 GMPPBQ9Y5P6 360 aa5.76□□□□□ -1.49
USP54-208ENST00000461520 NOTCH3Q9UM47 2321 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 DNAH3Q8TD57 4116 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 DSCAML1Q8TD84 2053 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 KBTBD11-OT1A0A1B0GTJ5 212 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 FAM172BPA6NC97 362 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 H0YJX3 145 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 M0QZK8 103 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 MAGEB3O15480 346 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 FAM106CPP0CH98 169 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 CGB3P0DN86 165 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 CGB7P0DN87 165 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 CD24P25063 80 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 C21orf33P30042 268 aaPredicted RBP5.75□□□□□ -1.49
USP54-208ENST00000461520 GBX2P52951 348 aaPredicted RBP5.75□□□□□ -1.49
USP54-208ENST00000461520 PAX5Q02548 391 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 IL13RA2Q14627 380 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 ATXN7L3Q14CW9 347 aaPredicted RBP5.75□□□□□ -1.49
USP54-208ENST00000461520 ABCA11PQ4W5N1 156 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 TPTE2P1Q5T6R2 138 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 ZNF691Q5VV52 312 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 FAM90A2PQ658T7 463 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 CBR4Q8N4T8 237 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 OR4X2Q8NGF9 303 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 OR9G1Q8NH87 305 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 RHOXF1Q8NHV9 184 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 MRAPQ8TCY5 172 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 SGCDQ92629 289 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 PHF21AQ96BD5 680 aa5.75□□□□□ -1.49
USP54-208ENST00000461520 ZNF649Q9BS31 505 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms