RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 NPVFQ9HCQ7 196 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 WNT16Q9UBV4 365 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 LNP1A1A4G5 178 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 PPM1DO15297 605 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 TNFSF14O43557 240 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 MPZL1O95297 269 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 EML2O95834 649 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 BCL2P10415 239 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 SELENOTP62341 195 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 CT55Q8WUE5 264 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 TMEM171Q8WVE6 324 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 SGK494Q96LW2 274 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 ABHD1Q96SE0 405 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 FAM181BA6NEQ2 426 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 DNAL4O96015 105 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 HLA-DQA1P01909 254 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 CXCL10P02778 98 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 EPHA8P29322 1005 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-205ENST00000461221 CLPPQ16740 277 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-205ENST00000461221 OR4A5Q8NH83 315 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 GALNT14Q96FL9 552 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 RAX2Q96IS3 184 aa7.88□□□□□ -1.15
BRCA1-205ENST00000461221 LINC00862A6NCI5 91 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 TSPAN13O95857 204 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 PPP1R17O96001 155 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 PSG2P11465 335 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 MEIG1Q5JSS6 88 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 TMEM136Q6ZRR5 245 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 MS4A7Q9GZW8 240 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-205ENST00000461221 SLC25A10Q9UBX3 287 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-205ENST00000461221 OPN4Q9UHM6 478 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 TINAGQ9UJW2 476 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 TNFSF18Q9UNG2 199 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 IGLV3-16A0A075B6K0 115 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 ASPDHA6ND91 283 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 SFTPCP11686 197 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 TRIP6Q15654 476 aaKnown RBP7.87□□□□□ -1.15
BRCA1-205ENST00000461221 PAPPA-AS1Q5QFB9 102 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 RHBDD2Q6NTF9 364 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 SGMS2Q8NHU3 365 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 TIMP4Q99727 224 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 LHX9Q9NQ69 397 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 PRR13Q9NZ81 148 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 HSPB7Q9UBY9 170 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 HSF4Q9ULV5 492 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 SF3B6Q9Y3B4 125 aaKnown RBP7.87□□□□□ -1.15
BRCA1-205ENST00000461221 MYO18AQ92614 2054 aaKnown RBP7.87□□□□□ -1.15
BRCA1-205ENST00000461221 ATP6V0CP27449 155 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 PSG9Q00887 426 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 MESTQ5EB52 335 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 LAMTOR1Q6IAA8 161 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 C9orf62Q8N4C0 152 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 APOBEC4Q8WW27 367 aaKnown RBP7.87□□□□□ -1.15
BRCA1-205ENST00000461221 PGLYRP3Q96LB9 341 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 AKIRIN1Q9H9L7 192 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-205ENST00000461221 GPR35Q9HC97 309 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 UQCR10Q9UDW1 63 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 K7N7A8 449 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 CTSVO60911 334 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 RPL27AP46776 148 aaKnown RBP7.87□□□□□ -1.15
BRCA1-205ENST00000461221 CDX1P47902 265 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-205ENST00000461221 TNFSF10P50591 281 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 NAAAQ02083 359 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 IBA57Q5T440 356 aaKnown RBP7.87□□□□□ -1.15
BRCA1-205ENST00000461221 THSD4Q6ZMP0 1018 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 SH2D5Q6ZV89 423 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 LYZL2Q7Z4W2 148 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 ABHD14BQ96IU4 210 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 SLC6A13Q9NSD5 602 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 TMEM56-RWDD3S4R434 201 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 PPIAL4EA0A075B759 164 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 C21orf140B9A014 251 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 PPIAL4DF5H284 164 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 AMY1AP04745 511 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 PPIAL4FP0DN26 164 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 MC5RP33032 325 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 GUCA2BQ16661 112 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 DPH3Q96FX2 82 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 MARS2Q96GW9 593 aaKnown RBP7.87□□□□□ -1.15
BRCA1-205ENST00000461221 GPA33Q99795 319 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 HSPB9Q9BQS6 159 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 PPIAL4AQ9Y536 164 aa7.87□□□□□ -1.15
BRCA1-205ENST00000461221 A0A1B0GTL3 188 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 CEACAM18A8MTB9 384 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 LINC01565O15544 149 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 GAPDHP04406 335 aaKnown RBP7.86□□□□□ -1.15
BRCA1-205ENST00000461221 HES3Q5TGS1 186 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 ATG4DQ86TL0 474 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-205ENST00000461221 GCSAMQ8N6F7 178 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 ALG14Q96F25 216 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 ST6GAL2Q96JF0 529 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 PARD6GQ9BYG4 376 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-205ENST00000461221 FRRS1LQ9P0K9 344 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 S1PR2O95136 353 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 FAM106CPP0CH98 169 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 GPR6P46095 362 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-205ENST00000461221 PGFP49763 221 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 NXPH1P58417 271 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 PLAURQ03405 335 aa7.86□□□□□ -1.15
BRCA1-205ENST00000461221 ISXQ2M1V0 245 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms