RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SYNGR1O43759 233 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 SNRNP70P08621 437 aaKnown RBP7.53□□□□□ -1.2
HDAC3-202ENST00000459727 ZNF14P17017 642 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-202ENST00000459727 RAB5AP20339 215 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 WNT5AP41221 380 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 DYNLT3P51808 116 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 ERVK11-1P61568 191 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 PPP1CBP62140 327 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 PMS2P11Q13670 270 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 IGFBP7Q16270 282 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 ATP6V1FQ16864 119 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 PLA2G2CQ5R387 149 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 MDP1Q86V88 176 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 C17orf78Q8N4C9 275 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 HIST1H2BAQ96A08 127 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 P2RX4Q99571 388 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 NIPSNAP3BQ9BS92 247 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 ADAT1Q9BUB4 502 aaKnown RBP7.53□□□□□ -1.2
HDAC3-202ENST00000459727 SCRT1Q9BWW7 348 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 FGF23Q9GZV9 251 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-202ENST00000459727 SH3BGRL3Q9H299 93 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 ARRDC1-AS1Q9H2J1 176 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 ZDHHC11Q9H8X9 412 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 RAB9BQ9NP90 201 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 TMEM9BQ9NQ34 198 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 PLA2G2EQ9NZK7 142 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 METTL1Q9UBP6 276 aaKnown RBP7.53□□□□□ -1.2
HDAC3-202ENST00000459727 RNF115Q9Y4L5 304 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 WIPI2Q9Y4P8 454 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 RBM7Q9Y580 266 aaKnown RBP7.53□□□□□ -1.2
HDAC3-202ENST00000459727 TIMM9Q9Y5J7 89 aa7.53□□□□□ -1.2
HDAC3-202ENST00000459727 ASCC3Q8N3C0 2202 aaKnown RBP7.52□□□□□ -1.2
HDAC3-202ENST00000459727 CACNA1BQ00975 2339 aa7.52□□□□□ -1.2
HDAC3-202ENST00000459727 RIF1Q5UIP0 2472 aaKnown RBP7.52□□□□□ -1.21
HDAC3-202ENST00000459727 IGKV1D-13A0A0B4J2D9 117 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 IGKV1-6A0A0C4DH72 117 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 LNP1A1A4G5 178 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 C9JQL5 133 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 PROB1E7EW31 1015 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 UBE2CO00762 179 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 HS3ST1O14792 307 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 SYNGR2O43760 224 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 CHST1O43916 411 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 SMPD2O60906 423 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 NXPH2O95156 264 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 IL18BPO95998 194 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 F12P00748 615 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-202ENST00000459727 NGFP01138 241 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 MBP02144 154 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 CELA3AP09093 270 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 SP9P0CG40 484 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 PGA5P0DJD9 388 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 IGKV1-13P0DP09 117 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 CD59P13987 128 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 AGAP20933 346 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 NFYBP25208 207 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 PRSS12P56730 875 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 ARG2P78540 354 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 RSPO4Q2I0M5 234 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-202ENST00000459727 ZNF766Q5HY98 468 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 CXorf66Q5JRM2 361 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-202ENST00000459727 C9orf135Q5VTT2 229 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 Q6P435 159 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 LINC00696Q6ZRV3 163 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 WDR31Q8NA23 367 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 SUMF1Q8NBK3 374 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 PRR7Q8TB68 274 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 TCTEX1D2Q8WW35 142 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 RDH5Q92781 318 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 WDYHV1Q96HA8 205 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 CYYR1Q96J86 154 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 CIB3Q96Q77 187 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-202ENST00000459727 CLCC1Q96S66 551 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 TOLLIPQ9H0E2 274 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 SEBOXQ9HB31 216 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-202ENST00000459727 ERRFI1Q9UJM3 462 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-202ENST00000459727 FBXO7Q9Y3I1 522 aa7.52□□□□□ -1.21
HDAC3-202ENST00000459727 NCOA6Q14686 2063 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-202ENST00000459727 GVINP1Q7Z2Y8 2422 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 CABIN1Q9Y6J0 2220 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 CHD8Q9HCK8 2581 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 OOEPA6NGQ2 149 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 IFNL4K9M1U5 179 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 SLC33A1O00400 549 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-202ENST00000459727 HSPB6O14558 160 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 TNFSF15O95150 251 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 OR2C1O95371 312 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 OR2H2O95918 312 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 IGHG3P01860 377 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 GLI4P10075 376 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 CBR1P16152 277 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 CA6P23280 308 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 OMGP23515 440 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 PPP1CCP36873 323 aaKnown RBP7.51□□□□□ -1.21
HDAC3-202ENST00000459727 EIF2S3P41091 472 aaKnown RBP7.51□□□□□ -1.21
HDAC3-202ENST00000459727 MEOX2P50222 304 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 PAX5Q02548 391 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 NHLH1Q02575 133 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 PDCD1Q15116 288 aa7.51□□□□□ -1.21
HDAC3-202ENST00000459727 EIF2S3LQ2VIR3 472 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms