RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MMDQ15546 238 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 PARP11Q9NR21 331 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 MPC1Q9Y5U8 109 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 LOXL3P58215 753 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 SLC25A42Q86VD7 318 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 STARD4Q96DR4 205 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 CDX2Q99626 313 aaPredicted RBP17.16■□□□□ 0.34
SNX27-204ENST00000458013 GPA33Q99795 319 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 DLX1P56177 255 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 HERVK_113P61574 105 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 KCNMB2Q9Y691 235 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 RPLP1P05386 114 aaKnown RBP17.16■□□□□ 0.34
SNX27-204ENST00000458013 SLC35E3Q7Z769 313 aa17.16■□□□□ 0.34
SNX27-204ENST00000458013 SNRNP40Q96DI7 357 aaKnown RBP17.16■□□□□ 0.34
SNX27-204ENST00000458013 SMPD2O60906 423 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 CLDN14O95500 239 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 LEAP2Q969E1 77 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 TMEM191AQ9H0A3 160 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 IGHV3OR16-10A0A075B7F0 116 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 IGKV3OR2-268A0A0C4DH90 116 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 PLAURQ03405 335 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 HCP5Q6MZN7 132 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 FAHD2BQ6P2I3 314 aaPredicted RBP17.15■□□□□ 0.34
SNX27-204ENST00000458013 PERPQ96FX8 193 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 FAHD2AQ96GK7 314 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 WFIKKN1Q96NZ8 548 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 RNF122Q9H9V4 155 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 PAPPAQ13219 1627 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 ZIC3O60481 467 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 IFITM10A6NMD0 228 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 H3BTX0 84 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 M0R296 226 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 REG1AP05451 166 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 PCED1AQ9H1Q7 454 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 WNT16Q9UBV4 365 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 CCL21O00585 134 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 VSIG8P0DPA2 414 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 KLF9Q13886 244 aaPredicted RBP17.15■□□□□ 0.34
SNX27-204ENST00000458013 RHBDD2Q6NTF9 364 aa17.15■□□□□ 0.34
SNX27-204ENST00000458013 HMSDA8MTL9 139 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 SCN7AQ01118 1682 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 MFSD2BA6NFX1 497 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 WDR34Q96EX3 536 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 MS4A3Q96HJ5 214 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 SGK494Q96LW2 274 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 RSG1Q9BU20 258 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 OR5AC2Q9NZP5 309 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 A0A1W2PPV9 198 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 RPL36A-HNRNPH2H7BZ11 118 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 TNFSF14O43557 240 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 CD300LDQ6UXZ3 194 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 RHOVQ96L33 236 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 TMEM38BQ9NVV0 291 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 CD160O95971 181 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 GUCD1Q96NT3 240 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 TTTY12Q9BZ98 90 aa17.14■□□□□ 0.33
SNX27-204ENST00000458013 ZNF324O75467 553 aaPredicted RBP17.13■□□□□ 0.33
SNX27-204ENST00000458013 HIST1H1BP16401 226 aaKnown RBP17.13■□□□□ 0.33
SNX27-204ENST00000458013 DCAF12L2Q5VW00 463 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 LILRA6Q6PI73 481 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 HAX1O00165 279 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 OR2W1Q9Y3N9 320 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 J3QR06 171 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 CORTO00230 105 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 CXorf1O96002 111 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 NAT2P11245 290 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 BRS3P32247 399 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 TAS2R60P59551 318 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 ZNF343Q6P1L6 599 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 WDR74Q6RFH5 385 aaPredicted RBP17.13■□□□□ 0.33
SNX27-204ENST00000458013 ZNF831Q5JPB2 1677 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 SYNGR1O43759 233 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 UPK3AO75631 287 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 GUCA2BQ16661 112 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 PRDM14Q9GZV8 571 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 HIGD1AQ9Y241 93 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 SIRT4Q9Y6E7 314 aaPredicted RBP17.13■□□□□ 0.33
SNX27-204ENST00000458013 KLK2P20151 261 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 GGTLC2Q14390 218 aa17.13■□□□□ 0.33
SNX27-204ENST00000458013 NUBP1P53384 320 aa17.12■□□□□ 0.33
SNX27-204ENST00000458013 NANOS3P60323 173 aaKnown RBP17.12■□□□□ 0.33
SNX27-204ENST00000458013 ROM1Q03395 351 aa17.12■□□□□ 0.33
SNX27-204ENST00000458013 BPIFA4PQ86YQ2 179 aa17.12■□□□□ 0.33
SNX27-204ENST00000458013 RREB1Q92766 1687 aa17.12■□□□□ 0.33
SNX27-204ENST00000458013 HMGA2P52926 109 aa17.12■□□□□ 0.33
SNX27-204ENST00000458013 ZNF826PQ6ZT77 177 aa17.12■□□□□ 0.33
SNX27-204ENST00000458013 CHODLQ9H9P2 273 aa17.12■□□□□ 0.33
SNX27-204ENST00000458013 GAB4Q2WGN9 574 aa17.12■□□□□ 0.33
SNX27-204ENST00000458013 DEGS2Q6QHC5 323 aa17.12■□□□□ 0.33
SNX27-204ENST00000458013 PAXXQ9BUH6 204 aa17.12■□□□□ 0.33
SNX27-204ENST00000458013 RBM38Q9H0Z9 239 aaKnown RBP17.12■□□□□ 0.33
SNX27-204ENST00000458013 SCN3AQ9NY46 2000 aa17.12■□□□□ 0.33
SNX27-204ENST00000458013 ZNF764Q96H86 408 aaPredicted RBP17.12■□□□□ 0.33
SNX27-204ENST00000458013 A0A1W2PP11 408 aa17.11■□□□□ 0.33
SNX27-204ENST00000458013 CD74P04233 296 aa17.11■□□□□ 0.33
SNX27-204ENST00000458013 GALP22466 123 aa17.11■□□□□ 0.33
SNX27-204ENST00000458013 ATP6V0CP27449 155 aa17.11■□□□□ 0.33
SNX27-204ENST00000458013 FAM3BP58499 235 aaPredicted RBP17.11■□□□□ 0.33
SNX27-204ENST00000458013 FXYD3Q14802 87 aa17.11■□□□□ 0.33
SNX27-204ENST00000458013 TEPPQ6URK8 271 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms