RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-208	ENST00000456173		A0A1B0GU03	582 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	PRRT4	C9JH25	899 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	OR4A8	P0C604	315 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	GGTLC2	Q14390	218 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	FNDC7	Q5VTL7	733 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	NT5C	Q8TCD5	201 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	MENT	Q9BUN1	341 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	TPR	P12270	2363 aa	Known RBP	10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173		A0A087WWC5	75 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	NGF	P01138	241 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	IGHV3-13	P01766	116 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	IGHV3-7	P01780	117 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	HLA-DQA1	P01909	254 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	AMBP	P02760	352 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	COL8A1	P27658	744 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	AQP3	Q92482	292 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	OR2V2	Q96R30	315 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	LMX1B	O60663	402 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	VEGFB	P49765	207 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	DNLZ	Q5SXM8	178 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	C1orf185	Q5T7R7	199 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	ZNF774	Q6NX45	483 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	TMEM108	Q6UXF1	575 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	MRGPRX4	Q96LA9	322 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	ZBP1	Q9H171	429 aa		10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	BOK	Q9UMX3	212 aa	Predicted RBP	10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	DDX60L	Q5H9U9	1706 aa	Known RBP	10.8	□□□□□ -0.68
NEDD4L-208	ENST00000456173	TRAV39	A0A0B4J263	110 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	CXCL1	P09341	107 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	NPY1R	P25929	384 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	CEBPD	P49716	269 aa	Predicted RBP	10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	UNQ9370/PRO34162	Q6UXP9	181 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	OR13H1	Q8NG92	308 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	ZNF519	Q8TB69	540 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	FLYWCH2	Q96CP2	140 aa	Known RBP	10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	TJP1	Q07157	1748 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	UBR2	Q8IWV8	1755 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	FGF16	O43320	207 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	PATE4	P0C8F1	98 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	CSRP3	P50461	194 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	PRSS53	Q2L4Q9	553 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	SNAI3	Q3KNW1	292 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	LY6G6F	Q5SQ64	297 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	R3HDM4	Q96D70	268 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	CXCL13	O43927	109 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	ORM2	P19652	201 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	DEFB103A	P81534	67 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	CEACAM16	Q2WEN9	425 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	FAM78A	Q5JUQ0	283 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	UPK3A	O75631	287 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	OPRK1	P41145	380 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	ZNF141	Q15928	474 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	FAM19A2	Q8N3H0	131 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	C8orf44	Q96CB5	159 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	NHS	Q6T4R5	1651 aa		10.79	□□□□□ -0.68
NEDD4L-208	ENST00000456173	HLA-DRB1	P01911	266 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	BTF3	P20290	206 aa	Known RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	YPEL5	P62699	121 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	DCD	P81605	110 aa	Known RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	RABEPK	Q7Z6M1	372 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	APOBEC3D	Q96AK3	386 aa	Predicted RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	MUCL1	Q96DR8	90 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	SPACA9	Q96E40	222 aa	Predicted RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	GUCD1	Q96NT3	240 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	OR6C1	Q96RD1	312 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	QTRT1	Q9BXR0	403 aa	Known RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	SMCHD1	A6NHR9	2005 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	TNFSF11	O14788	317 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	IGHV2-70	P01814	119 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	RPL11	P62913	178 aa	Known RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	IBA57	Q5T440	356 aa	Known RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	CXorf67	Q86X51	503 aa	Predicted RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	SOX21	Q9Y651	276 aa	Predicted RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	HS3ST3A1	Q9Y663	406 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173		A0A1B0GX78	115 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	TMEM30CP	A0ZSE6	113 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	SP1	P08047	785 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	ZNF664	Q8N3J9	261 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	C5orf17	Q8NAS9	161 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	RPRM	Q9NS64	109 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	TAAR3P	Q9P1P4	343 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	YBX2	Q9Y2T7	364 aa	Known RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	SPCS1	Q9Y6A9	102 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	TRAV38-1	A0A0B4J264	116 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	CEACAM5	P06731	702 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	CRYBA2	P53672	197 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	SPRED2	Q7Z698	418 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	ATG4D	Q86TL0	474 aa	Predicted RBP	10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	VASH2	Q86V25	355 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	MMD2	Q8IY49	270 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	TMEM106B	Q9NUM4	274 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	AP5S1	Q9NUS5	200 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	RNF186	Q9NXI6	227 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173	MYO7A	Q13402	2215 aa		10.78	□□□□□ -0.68
NEDD4L-208	ENST00000456173		A0A1W2PRS3	328 aa		10.77	□□□□□ -0.68
NEDD4L-208	ENST00000456173	CA1	P00915	261 aa	Predicted RBP	10.77	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms