RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 MADCAM1Q13477 382 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 UBE2V2Q15819 145 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 SPIN3Q5JUX0 258 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 SLX4IPQ5VYV7 408 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 LGALS9CQ6DKI2 356 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 IL34Q6ZMJ4 242 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 SLC16A12Q6ZSM3 486 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 ASRGL1Q7L266 308 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 ARPINQ7Z6K5 226 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 TRAPPC6BQ86SZ2 158 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 Q8IYB0 196 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 ENTHD1Q8IYW4 607 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 PGAM4Q8N0Y7 254 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 PRR26Q8N8Z3 221 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 MINDY2Q8NBR6 621 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 OR2T33Q8NG76 320 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 OR8H1Q8NGG4 311 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 OR52L1Q8NGH7 329 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 OR4D6Q8NGJ1 314 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 TRMT10AQ8TBZ6 339 aaKnown RBP2.78□□□□□ -1.96
RBM39-220ENST00000455343 HAVCR2Q8TDQ0 301 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 THEM6Q8WUY1 208 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 NPIPB3Q92617 1050 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 COQ2Q96H96 371 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 OR5B12Q96R08 314 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 OR4C12Q96R67 309 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 S1PR3Q99500 378 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 FAM110AQ9BQ89 295 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 SIKE1Q9BRV8 207 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 ST6GALNAC5Q9BVH7 336 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 TSSK6Q9BXA6 273 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 CADM1Q9BY67 442 aaKnown RBP2.78□□□□□ -1.96
RBM39-220ENST00000455343 PARD6BQ9BYG5 372 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 PBOV1Q9GZY1 135 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 ALX4Q9H161 411 aaPredicted RBP2.78□□□□□ -1.96
RBM39-220ENST00000455343 NCOR1P1Q9H4R4 102 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 TMBIM4Q9HC24 238 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 RETNQ9HD89 108 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 GPR173Q9NS66 373 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 MRGBPQ9NV56 204 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 ACTR3BQ9P1U1 418 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 ABCD2Q9UBJ2 740 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 GLS2Q9UI32 602 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 RAB21Q9UL25 225 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 KLHDC2Q9Y2U9 406 aa2.78□□□□□ -1.96
RBM39-220ENST00000455343 AMMECR1Q9Y4X0 333 aaPredicted RBP2.78□□□□□ -1.96
RBM39-220ENST00000455343 UBR4Q5T4S7 5183 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 A0A087WYN8 130 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 IGHV3-72A0A0B4J1Y9 119 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 A0A1B0GVY2 172 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 FUOMA2VDF0 154 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 A6NIN4 97 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 FAM183AA6NL82 134 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 ZNF736B4DX44 427 aaPredicted RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 G3V318 75 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 HSD17B6O14756 317 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 ARPC1BO15143 372 aaKnown RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 SOX15O60248 233 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 SELENOFO60613 162 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 EDF1O60869 148 aaKnown RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 ZNF254O75437 659 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 KRT36O76013 467 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 RGS11O94810 467 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 OR2H2O95918 312 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 IFNGP01579 166 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 IL1AP01583 271 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 IGKV3-20P01619 116 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 GAPDHP04406 335 aaKnown RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 HSPB1P04792 205 aaKnown RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 LGALS1P09382 135 aaKnown RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 H2AFXP16104 143 aaPredicted RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 NCK1P16333 377 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 ZNF3P17036 446 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 CCL1P22362 96 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 CD1BP29016 333 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 HTR1FP30939 366 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 RRM2P31350 389 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 SOX6P35712 828 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 RASSF2P50749 326 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 FUT6P51993 359 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 CRIP2P52943 208 aaPredicted RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 F2RL1P55085 397 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 PITPNAQ00169 270 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 PAX5Q02548 391 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 MFGE8Q08431 387 aaPredicted RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 RAB40BQ12829 278 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 SF3A3Q12874 501 aaKnown RBP eCLIP2.77□□□□□ -1.973e-33■■□□□ 13.8
RBM39-220ENST00000455343 RBM39Q14498 530 aaKnown RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 MAPRE2Q15555 327 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 SAMD4BQ5PRF9 694 aaKnown RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 GLYATQ6IB77 296 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 Q6P435 159 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 CEMP1Q6PRD7 247 aaPredicted RBP2.77□□□□□ -1.97
RBM39-220ENST00000455343 GSG1LQ6UXU4 331 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 SLC25A26Q70HW3 274 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 HAPLN4Q86UW8 402 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 ZNF679Q8IYX0 411 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 ELMOD2Q8IZ81 293 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 FAM58AQ8N1B3 248 aa2.77□□□□□ -1.97
RBM39-220ENST00000455343 LINC00311Q8N616 119 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms