RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SSMEM1Q8WWF3 244 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 TMEM158Q8WZ71 300 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 MALSU1Q96EH3 234 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 ATG5Q9H1Y0 275 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 RIMS4Q9H426 269 aaPredicted RBP22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 ZMAT3Q9HA38 289 aaKnown RBP22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 ETV7Q9Y603 341 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 MINOS1-NBL1R4GNA1 71 aa22.69■■□□□ 1.22
SMARCC1-203ENST00000454240 TRBV6-6A0A0A6YYG2 114 aa22.68■■□□□ 1.22
SMARCC1-203ENST00000454240 SERPINB10P48595 397 aa22.68■■□□□ 1.22
SMARCC1-203ENST00000454240 LOXL3P58215 753 aa22.68■■□□□ 1.22
SMARCC1-203ENST00000454240 Q6ZPA2 131 aa22.68■■□□□ 1.22
SMARCC1-203ENST00000454240 OR5H6Q8NGV6 325 aa22.68■■□□□ 1.22
SMARCC1-203ENST00000454240 UBALD1Q8TB05 177 aa22.68■■□□□ 1.22
SMARCC1-203ENST00000454240 TAF9BQ9HBM6 251 aa22.68■■□□□ 1.22
SMARCC1-203ENST00000454240 RAB9BQ9NP90 201 aa22.68■■□□□ 1.22
SMARCC1-203ENST00000454240 ABRACLQ9P1F3 81 aa22.68■■□□□ 1.22
SMARCC1-203ENST00000454240 POMT1Q9Y6A1 747 aa22.68■■□□□ 1.22
SMARCC1-203ENST00000454240 SPINT2O43291 252 aa22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 HBZP02008 142 aa22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 RNASE1P07998 156 aaKnown RBP22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 RPL5P46777 297 aaKnown RBP22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 OLFML2AQ68BL7 652 aa22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 DYNAPQ8N1N2 210 aa22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 OR9G1Q8NH87 305 aa22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 FAM216AQ8WUB2 273 aa22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 SLC25A46Q96AG3 418 aa22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 MDFIQ99750 246 aa22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 HDHD3Q9BSH5 251 aaPredicted RBP22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 KCNIP1Q9NZI2 227 aa22.67■■□□□ 1.22
SMARCC1-203ENST00000454240 MFNGO00587 321 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 TOR1AO14656 332 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 IGHV4-59P01825 116 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 HIST1H1DP16402 221 aaKnown RBP22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 PAX6P26367 422 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 HTR1DP28221 377 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 PRRX1P54821 245 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 TMEM30BQ3MIR4 351 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 OR1L1Q8NH94 360 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 LEAP2Q969E1 77 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 CMSS1Q9BQ75 279 aaKnown RBP22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 DPAGT1Q9H3H5 408 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 CHMP1AQ9HD42 196 aaPredicted RBP22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 RHBDL2Q9NX52 303 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 GFOD1Q9NXC2 390 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 SPATA2Q9UM82 520 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 PSG11Q9UQ72 335 aa22.66■■□□□ 1.22
SMARCC1-203ENST00000454240 POM121CA8CG34 1229 aa22.65■■□□□ 1.22
SMARCC1-203ENST00000454240 J3QR06 171 aa22.65■■□□□ 1.22
SMARCC1-203ENST00000454240 SDCBPO00560 298 aaPredicted RBP22.65■■□□□ 1.22
SMARCC1-203ENST00000454240 GNB3P16520 340 aa22.65■■□□□ 1.22
SMARCC1-203ENST00000454240 HLA-DRB5Q30154 266 aa22.65■■□□□ 1.22
SMARCC1-203ENST00000454240 PRR18Q8N4B5 295 aa22.65■■□□□ 1.22
SMARCC1-203ENST00000454240 C12orf4Q9NQ89 552 aa22.65■■□□□ 1.22
SMARCC1-203ENST00000454240 IGHV3-7P01780 117 aa22.64■■□□□ 1.21
SMARCC1-203ENST00000454240 HMGN3Q15651 99 aa22.64■■□□□ 1.21
SMARCC1-203ENST00000454240 SSX2Q16385 188 aa22.64■■□□□ 1.21
SMARCC1-203ENST00000454240 AANATQ16613 207 aa22.64■■□□□ 1.21
SMARCC1-203ENST00000454240 C5orf24Q7Z6I8 188 aa22.64■■□□□ 1.21
SMARCC1-203ENST00000454240 SLC25A38Q96DW6 304 aa22.64■■□□□ 1.21
SMARCC1-203ENST00000454240 MMP28Q9H239 520 aa22.64■■□□□ 1.21
SMARCC1-203ENST00000454240 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.64■■□□□ 1.21
SMARCC1-203ENST00000454240 DPM3Q9P2X0 92 aa22.64■■□□□ 1.21
SMARCC1-203ENST00000454240 RNF212BA8MTL3 300 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 SERPINE3A8MV23 424 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 BUB1B-PAK6H3BSN5 160 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 SCGNO76038 276 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 FAM53AQ6NSI3 398 aaPredicted RBP22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 C16orf87Q6PH81 154 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 MOB1BQ7L9L4 216 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 NDNFQ8TB73 568 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 CREB3L1Q96BA8 519 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 SSX3Q99909 188 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 CHIAQ9BZP6 476 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 TNFRSF19Q9NS68 423 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 SCOCQ9UIL1 159 aa22.63■■□□□ 1.21
SMARCC1-203ENST00000454240 IGHV3-43A0A0B4J1X8 118 aa22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 LY6LH3BQJ8 138 aa22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 IGHV3-43DP0DP04 118 aa22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 HTD2P86397 168 aa22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 ARL6IP1Q15041 203 aa22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 LRRC75BQ2VPJ9 315 aa22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 Q3ZCU0 254 aa22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 C8orf31Q8N9H6 132 aa22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 SETD6Q8TBK2 473 aa22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 KCTD12Q96CX2 325 aaKnown RBP22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 C19orf24Q9BVV8 132 aa22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 Q9N2K0 584 aa22.62■■□□□ 1.21
SMARCC1-203ENST00000454240 A0A075B6Q4 140 aa22.61■■□□□ 1.21
SMARCC1-203ENST00000454240 VGLL3A8MV65 326 aa22.61■■□□□ 1.21
SMARCC1-203ENST00000454240 LEUTXA8MZ59 168 aa22.61■■□□□ 1.21
SMARCC1-203ENST00000454240 CD3GP09693 182 aa22.61■■□□□ 1.21
SMARCC1-203ENST00000454240 GNG10P50151 68 aa22.61■■□□□ 1.21
SMARCC1-203ENST00000454240 CLVS1Q8IUQ0 354 aaPredicted RBP22.61■■□□□ 1.21
SMARCC1-203ENST00000454240 OR5R1Q8NH85 324 aa22.61■■□□□ 1.21
SMARCC1-203ENST00000454240 GALMQ96C23 342 aa22.61■■□□□ 1.21
SMARCC1-203ENST00000454240 DCSTAMPQ9H295 470 aa22.61■■□□□ 1.21
SMARCC1-203ENST00000454240 MGAT4AQ9UM21 535 aa22.61■■□□□ 1.21
SMARCC1-203ENST00000454240 HILPDAQ9Y5L2 63 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms