RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 FAM90A2PQ658T7 463 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 ZNF600Q6ZNG1 722 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 C20orf204Q6ZNR8 217 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 ZDHHC23Q8IYP9 409 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 H1FOOQ8IZA3 346 aaPredicted RBP13.44□□□□□ -0.26
TRA2B-205ENST00000453386 Q8NFD4 153 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 FREM2Q5SZK8 3169 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 B4DEV8 164 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 METTL15P1P0C7V9 234 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 BCL2P10415 239 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 ARF1P84077 181 aaKnown RBP13.44□□□□□ -0.26
TRA2B-205ENST00000453386 ABLIM2Q6H8Q1 611 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 HIST3H2BBQ8N257 126 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 OR10J5Q8NHC4 309 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 ABHD5Q8WTS1 349 aa13.44□□□□□ -0.26
TRA2B-205ENST00000453386 REPIN1Q9BWE0 567 aaKnown RBP13.44□□□□□ -0.26
TRA2B-205ENST00000453386 NOSIPQ9Y314 301 aaKnown RBP13.44□□□□□ -0.26
TRA2B-205ENST00000453386 CLDN34H7C241 214 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 MRPL33O75394 65 aaKnown RBP13.43□□□□□ -0.26
TRA2B-205ENST00000453386 GDF1P27539 372 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 SRYQ05066 204 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 SRSF7Q16629 238 aaKnown RBP eCLIP13.43□□□□□ -0.261e-8■□□□□ 9.4
TRA2B-205ENST00000453386 CEACAM21Q3KPI0 293 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 LYSMD4Q5XG99 296 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 Q6ZRM9 215 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 PSMF1Q92530 271 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 IL22RA2Q969J5 263 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 POM121Q96HA1 1249 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 RHOVQ96L33 236 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 HIST1H2AAQ96QV6 131 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 RAB40CQ96S21 281 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 CACNG5Q9UF02 275 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 A0A1B0GU03 582 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 MDKP21741 143 aaPredicted RBP13.43□□□□□ -0.26
TRA2B-205ENST00000453386 FOLR3P41439 243 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 ZNF880Q6PDB4 577 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 PCSK4Q6UW60 755 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 PRR18Q8N4B5 295 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 OR13D1Q8NGV5 346 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 CLDN23Q96B33 292 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 OR2W1Q9Y3N9 320 aa13.43□□□□□ -0.26
TRA2B-205ENST00000453386 TRAV1-1A0A0B4J248 108 aa13.42□□□□□ -0.26
TRA2B-205ENST00000453386 ZNF16P17020 682 aaPredicted RBP13.42□□□□□ -0.26
TRA2B-205ENST00000453386 ZNF295-AS1Q8N0V1 137 aa13.42□□□□□ -0.26
TRA2B-205ENST00000453386 ADGRG7Q96K78 797 aa13.42□□□□□ -0.26
TRA2B-205ENST00000453386 CISD1Q9NZ45 108 aaKnown RBP13.42□□□□□ -0.26
TRA2B-205ENST00000453386 OR5H1A6NKK0 313 aa13.42□□□□□ -0.26
TRA2B-205ENST00000453386 CEBPZOSA8MTT3 80 aa13.42□□□□□ -0.26
TRA2B-205ENST00000453386 OTX2P32243 289 aa13.42□□□□□ -0.26
TRA2B-205ENST00000453386 GPX4P36969 197 aaPredicted RBP13.42□□□□□ -0.26
TRA2B-205ENST00000453386 HNF4GQ14541 408 aa13.42□□□□□ -0.26
TRA2B-205ENST00000453386 COLCA1Q6ZS62 124 aa13.42□□□□□ -0.26
TRA2B-205ENST00000453386 OR10G4Q8NGN3 311 aa13.42□□□□□ -0.26
TRA2B-205ENST00000453386 RBM7Q9Y580 266 aaKnown RBP13.42□□□□□ -0.26
TRA2B-205ENST00000453386 ELOA3CA0A087WX78 387 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-205ENST00000453386 TRAV39A0A0B4J263 110 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 CD300LBA8K4G0 201 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 PGA5P0DJD9 388 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 HIST1H1BP16401 226 aaKnown RBP13.41□□□□□ -0.26
TRA2B-205ENST00000453386 LILRB2Q8N423 598 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 MRPL30Q8TCC3 161 aaKnown RBP13.41□□□□□ -0.26
TRA2B-205ENST00000453386 CABLES2Q9BTV7 478 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 PLK3Q9H4B4 646 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 PRDM13Q9H4Q3 707 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 ZNF552Q9H707 407 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-205ENST00000453386 PSENENQ9NZ42 101 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 LRRC3CA6NJW4 275 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 K7ESF4 209 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 PTBP3O95758 552 aaKnown RBP13.41□□□□□ -0.26
TRA2B-205ENST00000453386 CYB5R3P00387 301 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-205ENST00000453386 NGFP01138 241 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 PNRC1Q12796 327 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-205ENST00000453386 GAMTQ14353 236 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 SAXO1Q8IYX7 474 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 SNX22Q96L94 193 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 SSX3Q99909 188 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 PPP1R3CQ9UQK1 317 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 FREM1Q5H8C1 2179 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 SYNGR2O43760 224 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 ELLP55199 621 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-205ENST00000453386 TLE1Q04724 770 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 ARL16Q0P5N6 197 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 ZNF726P1Q15940 193 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 ZNF324BQ6AW86 544 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-205ENST00000453386 TCEAL6Q6IPX3 200 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 SSX7Q7RTT5 188 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 RCC1LQ96I51 464 aaKnown RBP13.41□□□□□ -0.26
TRA2B-205ENST00000453386 PRRG4Q9BZD6 226 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 HIPK2Q9H2X6 1198 aa13.41□□□□□ -0.26
TRA2B-205ENST00000453386 KIAA1549Q9HCM3 1950 aa13.4□□□□□ -0.26
TRA2B-205ENST00000453386 FAM186AA6NE01 2351 aa13.4□□□□□ -0.26
TRA2B-205ENST00000453386 KIAA1324LA8MWY0 1029 aaPredicted RBP13.4□□□□□ -0.26
TRA2B-205ENST00000453386 CYTIPO60759 359 aa13.4□□□□□ -0.26
TRA2B-205ENST00000453386 RIMS4Q9H426 269 aaPredicted RBP13.4□□□□□ -0.26
TRA2B-205ENST00000453386 DEPPQ9NTK1 212 aa13.4□□□□□ -0.26
TRA2B-205ENST00000453386 CFIP05156 583 aa13.4□□□□□ -0.26
TRA2B-205ENST00000453386 UBALD1Q8TB05 177 aa13.4□□□□□ -0.26
TRA2B-205ENST00000453386 CA5BP1Q8WTZ4 195 aa13.4□□□□□ -0.26
TRA2B-205ENST00000453386 OR51B6Q9H340 312 aa13.4□□□□□ -0.26
TRA2B-205ENST00000453386 PRO1933Q9H354 126 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms