RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 SSTR5P35346 364 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 KIR2DS4P43632 304 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 KIR2DS1Q14954 304 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 OR52M1Q8NGK5 317 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 GPX8Q8TED1 209 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 UPRTQ96BW1 309 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 TAF9BQ9HBM6 251 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 WNK2Q9Y3S1 2297 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 SVEP1Q4LDE5 3571 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 MEX3AA1L020 520 aaKnown RBP9.49□□□□□ -0.89
SCN9A-204ENST00000452182 A8MV72 311 aaPredicted RBP9.49□□□□□ -0.89
SCN9A-204ENST00000452182 TRDCB7Z8K6 153 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 F2RL2O00254 374 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 SPINT2O43291 252 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 DIRAS3O95661 229 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 LY6G6DO95868 133 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 PTHLHP12272 177 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 FPR2P25090 351 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 ERVFRD-1P60508 538 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 IL18Q14116 193 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 SPANXN2Q5MJ10 180 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 NCR3LG1Q68D85 454 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 OR52W1Q6IF63 320 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 CLEC9AQ6UXN8 241 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 VMO1Q7Z5L0 202 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 SNX29P2Q8IUI4 249 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 TEX29Q8N6K0 151 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 TNFRSF14Q92956 283 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 ARL11Q969Q4 196 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 KIRREL1Q96J84 757 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 TBX15Q96SF7 602 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 SMR3AQ99954 134 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 ANAPC10Q9UM13 185 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 V9GYH0 126 aa9.49□□□□□ -0.89
SCN9A-204ENST00000452182 A0A087X0M5 115 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 A0A1B0GX30 115 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 MEIOCA2RUB1 952 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 GABARAPH6UMI1 98 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 HBZP02008 142 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 LOXL3P58215 753 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 HLA-DRB3P79483 266 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 HTD2P86397 168 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 FAM131AQ6UXB0 335 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 C1orf229Q6ZS94 237 aaPredicted RBP9.48□□□□□ -0.89
SCN9A-204ENST00000452182 HOGA1Q86XE5 327 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 SETD6Q8TBK2 473 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 GALMQ96C23 342 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 PCGF1Q9BSM1 259 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 ST6GALNAC5Q9BVH7 336 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 ZNF286AQ9HBT8 521 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 IDI2-AS1Q9NZ38 188 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 ZNF230Q9UIE0 474 aaPredicted RBP9.48□□□□□ -0.89
SCN9A-204ENST00000452182 SESN1Q9Y6P5 492 aa9.48□□□□□ -0.89
SCN9A-204ENST00000452182 MMP23AO75900 390 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 NAT1P18440 290 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 OMGP23515 440 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 ZNF45Q02386 682 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 SSBP1Q04837 148 aaKnown RBP9.47□□□□□ -0.89
SCN9A-204ENST00000452182 Q3ZCU0 254 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 PRAMEF5Q5TYX0 476 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 STEAP3Q658P3 488 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 OR4A4PQ8NGN8 299 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 RFESDQ8TAC1 157 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 SMIM4Q8WVI0 70 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 FCAMRQ8WWV6 532 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 GCDHQ92947 438 aaPredicted RBP9.47□□□□□ -0.89
SCN9A-204ENST00000452182 TMEM133Q9H2Q1 129 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 HEXA-AS1Q9H8Q6 139 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 YAE1D1Q9NRH1 226 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 ANXA10Q9UJ72 324 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 CSPG4Q6UVK1 2322 aa9.47□□□□□ -0.89
SCN9A-204ENST00000452182 IGKV1D-8A0A087WSZ0 117 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 FABP7O15540 132 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 GSTZ1O43708 216 aaPredicted RBP9.46□□□□□ -0.89
SCN9A-204ENST00000452182 FSHBP01225 129 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 RPLP1P05386 114 aaKnown RBP9.46□□□□□ -0.89
SCN9A-204ENST00000452182 SCTP09683 121 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 CD34P28906 385 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 GDNFP39905 211 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 BPIFB3P59826 476 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 MADCAM1Q13477 382 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 ZNF79Q15937 498 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 LY6G6FQ5SQ64 297 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 PRR18Q8N4B5 295 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 GVQW1Q8N7I0 195 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 BEST4Q8NFU0 473 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 OR13D1Q8NGV5 346 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 OR1L1Q8NH94 360 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 MAFIPQ8WZ33 124 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 CABLES2Q9BTV7 478 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 SIRT7Q9NRC8 400 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 MTFP1Q9UDX5 166 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 ZNF107Q9UII5 783 aaPredicted RBP9.46□□□□□ -0.89
SCN9A-204ENST00000452182 JPT1Q9UK76 154 aa9.46□□□□□ -0.89
SCN9A-204ENST00000452182 RNASEK-C17orf49H0YIS7 233 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 SDCBPO00560 298 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-204ENST00000452182 RBBP9O75884 186 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 CTXN2P0C2S0 81 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 GSTT2P0CG29 244 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 GSTT2BP0CG30 244 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms