RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SIGIRRQ6IA17 410 aa9.89□□□□□ -0.83
CPSF4-208ENST00000452047 RAB12Q6IQ22 244 aa9.89□□□□□ -0.83
CPSF4-208ENST00000452047 IZUMO1Q8IYV9 350 aa9.89□□□□□ -0.83
CPSF4-208ENST00000452047 ZNF439Q8NDP4 499 aa9.89□□□□□ -0.83
CPSF4-208ENST00000452047 OR4X2Q8NGF9 303 aa9.89□□□□□ -0.83
CPSF4-208ENST00000452047 THRSPQ92748 146 aa9.89□□□□□ -0.83
CPSF4-208ENST00000452047 ST6GALNAC6Q969X2 333 aa9.89□□□□□ -0.83
CPSF4-208ENST00000452047 UQCC2Q9BRT2 126 aa9.89□□□□□ -0.83
CPSF4-208ENST00000452047 VCXQ9H320 206 aa9.89□□□□□ -0.83
CPSF4-208ENST00000452047 BANF2Q9H503 90 aa9.89□□□□□ -0.83
CPSF4-208ENST00000452047 ERGIC3Q9Y282 383 aa9.89□□□□□ -0.83
CPSF4-208ENST00000452047 LSM2Q9Y333 95 aaKnown RBP9.89□□□□□ -0.83
CPSF4-208ENST00000452047 TSSC4Q9Y5U2 329 aaPredicted RBP9.89□□□□□ -0.83
CPSF4-208ENST00000452047 IGHV3-43A0A0B4J1X8 118 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 TCRBV4S1A1TA0A5B7 111 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 CCRL2O00421 344 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 PRB2P02812 416 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-208ENST00000452047 GAPDHP04406 335 aaKnown RBP9.88□□□□□ -0.83
CPSF4-208ENST00000452047 IGHV3-43DP0DP04 118 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 VHLP40337 213 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 REG1BP48304 166 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 HES1Q14469 280 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 HNF4GQ14541 408 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 FAM27D1Q5T7N8 215 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 SYT6Q5T7P8 510 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-208ENST00000452047 UNQ9370/PRO34162Q6UXP9 181 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 Q8N6K4 173 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 WFDC9Q8NEX5 89 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 OR4K15Q8NH41 348 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 SGCDQ92629 289 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 PHF21AQ96BD5 680 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 MND1Q9BWT6 205 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 SELENOIQ9C0D9 397 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 DCLRE1BQ9H816 532 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 ETAA1Q9NY74 926 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 NKX1-2Q9UD57 310 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-208ENST00000452047 PEX16Q9Y5Y5 336 aa9.88□□□□□ -0.83
CPSF4-208ENST00000452047 IGHV3-72A0A0B4J1Y9 119 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 SLC31A2O15432 143 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 CA11O75493 328 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 CRTAPO75718 401 aaPredicted RBP9.87□□□□□ -0.83
CPSF4-208ENST00000452047 GLAP06280 429 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 PF4V1P10720 104 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 RCC1P18754 421 aaPredicted RBP9.87□□□□□ -0.83
CPSF4-208ENST00000452047 FUT3P21217 361 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 ZNF137PP52743 207 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 TMEM30BQ3MIR4 351 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 ACSM3Q53FZ2 586 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 C6orf141Q5SZD1 244 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 C6orf183Q5T699 404 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 Q6ZPA2 131 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 SLC25A48Q6ZT89 311 aaKnown RBP9.87□□□□□ -0.83
CPSF4-208ENST00000452047 REC114Q7Z4M0 266 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 LRRTM1Q86UE6 522 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 RTN4IP1Q8WWV3 396 aaPredicted RBP9.87□□□□□ -0.83
CPSF4-208ENST00000452047 EAF1Q96JC9 268 aaPredicted RBP9.87□□□□□ -0.83
CPSF4-208ENST00000452047 MBNL3Q9NUK0 354 aaKnown RBP9.87□□□□□ -0.83
CPSF4-208ENST00000452047 GHRLQ9UBU3 117 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 TRAPPC2LQ9UL33 140 aa9.87□□□□□ -0.83
CPSF4-208ENST00000452047 PSMB11A5LHX3 300 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 PTGES3LE9PB15 166 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 SPINT2O43291 252 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 PDCD6O75340 191 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 IGHG2P01859 326 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 HBZP02008 142 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 ZNF134P52741 427 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 AQP4P55087 323 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 SLC35A2P78381 396 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 GPR50Q13585 617 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 IRF3Q14653 427 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 SPHARQ15513 63 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 TRAT1Q6PIZ9 186 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 MOB3BQ86TA1 216 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 ZNF329Q86UD4 541 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 MS4A15Q8N5U1 240 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 OR1L1Q8NH94 360 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 NRG4Q8WWG1 115 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 PHYHIPQ92561 330 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 FAM46BQ96A09 425 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 NOL4LQ96MY1 436 aaPredicted RBP9.86□□□□□ -0.83
CPSF4-208ENST00000452047 TMED9Q9BVK6 235 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 GNG12Q9UBI6 72 aa9.86□□□□□ -0.83
CPSF4-208ENST00000452047 COL7A1Q02388 2944 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 UBE2QL1A1L167 161 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 PF4P02776 101 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 UBBP0CG47 229 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 VSIG8P0DPA2 414 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 CD37P11049 281 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 IGLL1P15814 213 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 CD33P20138 364 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 IL3RAP26951 378 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 CD1BP29016 333 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 CT45A1Q5HYN5 189 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 KHDC1LQ5JSQ8 128 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 C1orf100Q5SVJ3 147 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 SLC35E3Q7Z769 313 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 ZNF554Q86TJ5 538 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 TGIF2LXQ8IUE1 241 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 PRR18Q8N4B5 295 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 Q8N9W7 124 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms