RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 LYSMD2Q8IV50 215 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 GAPTQ8N292 157 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 TMEM229BQ8NBD8 167 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 OR13A1Q8NGR1 328 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 DMRTB1Q96MA1 342 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 TBX15Q96SF7 602 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 PCGF1Q9BSM1 259 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 NCOR1P1Q9H4R4 102 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 ZNF286AQ9HBT8 521 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 TMEM160Q9NX00 188 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 KPTNQ9Y664 436 aa10.7□□□□□ -0.7
VPS33A-202ENST00000451053 ZANQ9Y493 2812 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 DSCAML1Q8TD84 2053 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 TRGV10A0A0A0MS01 117 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 MEIS3P1A6NDR6 274 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 NAP1L6A6NFF2 107 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 ZNF736B4DX44 427 aaPredicted RBP10.69□□□□□ -0.7
VPS33A-202ENST00000451053 M0R1W7 72 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 LANCL1O43813 399 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 TOX4O94842 621 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 MT-ND4P03905 459 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 ZNF728P0DKX0 622 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 NAT1P18440 290 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 KIR2DS4P43632 304 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 TAS2R46P59540 309 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 ERVFRD-1P60508 538 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 ASAH1Q13510 395 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 KLF9Q13886 244 aaPredicted RBP10.69□□□□□ -0.7
VPS33A-202ENST00000451053 KIR2DS1Q14954 304 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 METTL11BQ5VVY1 283 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 MZT2BQ6NZ67 158 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 TRAT1Q6PIZ9 186 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 Q6ZS49 121 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 VMO1Q7Z5L0 202 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 C11orf42Q8N5U0 333 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 BEST4Q8NFU0 473 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 OR4K15Q8NH41 348 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 MRPL30Q8TCC3 161 aaKnown RBP10.69□□□□□ -0.7
VPS33A-202ENST00000451053 MRGPRDQ8TDS7 321 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 CCDC107Q8WV48 283 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 CORO2AQ92828 525 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 ZNF714Q96N38 554 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 HDHD3Q9BSH5 251 aaPredicted RBP10.69□□□□□ -0.7
VPS33A-202ENST00000451053 ST6GALNAC5Q9BVH7 336 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 SIRT7Q9NRC8 400 aa10.69□□□□□ -0.7
VPS33A-202ENST00000451053 UBE2J1Q9Y385 318 aaPredicted RBP10.69□□□□□ -0.7
VPS33A-202ENST00000451053 A0A1W2PPH5 198 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 C17orf98A8MV24 154 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 MMP23AO75900 390 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 AKAIN1P0CW23 69 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 CGB3P0DN86 165 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 CGB7P0DN87 165 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 IFITM3Q01628 133 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 MEF2DQ14814 521 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 C17orf58Q2M2W7 97 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 C6orf183Q5T699 404 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 Q6ZPA2 131 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 ZNF554Q86TJ5 538 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 UPRTQ96BW1 309 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 Q9N2K0 584 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 RAB9BQ9NP90 201 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 KCNIP1Q9NZI2 227 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 OR6C3Q9NZP0 311 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 TRAPPC2LQ9UL33 140 aa10.68□□□□□ -0.7
VPS33A-202ENST00000451053 IGHV3OR16-10A0A075B7F0 116 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 TRAV40A0A0B4J280 105 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 LYRM1O43325 122 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 FSHBP01225 129 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 HOXB4P17483 251 aaPredicted RBP10.67□□□□□ -0.7
VPS33A-202ENST00000451053 SSTR5P35346 364 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 OR3A3P47888 321 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 ARPC4P59998 168 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 KLRD1Q13241 179 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 RGS21Q2M5E4 152 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 CHRFAM7AQ494W8 412 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 RNASE10Q5GAN6 216 aaKnown RBP10.67□□□□□ -0.7
VPS33A-202ENST00000451053 KLF17Q5JT82 389 aaPredicted RBP10.67□□□□□ -0.7
VPS33A-202ENST00000451053 PRAMEF5Q5TYX0 476 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 STEAP1BQ6NZ63 245 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 ZNF880Q6PDB4 577 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 ZNF782Q6ZMW2 699 aaPredicted RBP10.67□□□□□ -0.7
VPS33A-202ENST00000451053 C1orf122Q6ZSJ8 110 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 GVQW1Q8N7I0 195 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 POC5Q8NA72 575 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 OR5H2Q8NGV7 314 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 TNFRSF14Q92956 283 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 METTL8Q9H825 291 aaKnown RBP10.67□□□□□ -0.7
VPS33A-202ENST00000451053 TAS2R3Q9NYW6 316 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 CALYQ9NYX4 217 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 ANXA10Q9UJ72 324 aa10.67□□□□□ -0.7
VPS33A-202ENST00000451053 KBTBD11-OT1A0A1B0GTJ5 212 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 LINC00854A0A1B0GVQ3 168 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 ZNF729A6NN14 1252 aaPredicted RBP10.66□□□□□ -0.7
VPS33A-202ENST00000451053 TRDCB7Z8K6 153 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 DISC1C4P0D8 188 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 RAB3DO95716 219 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 PTTG1O95997 202 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 RBP4P02753 201 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 CD74P04233 296 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 IFNA6P05013 189 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms