RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RRADP55042 308 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 BIDP55957 195 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 CLDN18P56856 261 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 YPEL3P61236 119 aaPredicted RBP7.41□□□□□ -1.22
LSM5-208ENST00000450169 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.41□□□□□ -1.22
LSM5-208ENST00000450169 TMEM52BQ4KMG9 183 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 KIAA2026Q5HYC2 2103 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 DMRTC1Q5HYR2 192 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 LY6G5CQ5SRR4 150 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 DNM1P34Q6PK57 102 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 BAGE3Q86Y29 109 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 BAGE2Q86Y30 109 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 ZNF695Q8IW36 515 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 CADM4Q8NFZ8 388 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 SSC4DQ8WTU2 575 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 LHX4Q969G2 390 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 FAM71F1Q96KD3 344 aaPredicted RBP7.41□□□□□ -1.22
LSM5-208ENST00000450169 PSMG3Q9BT73 122 aaPredicted RBP7.41□□□□□ -1.22
LSM5-208ENST00000450169 RBM24Q9BX46 236 aaKnown RBP7.41□□□□□ -1.22
LSM5-208ENST00000450169 TM2D1Q9BX74 207 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 SLC46A2Q9BY10 475 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 WNT10AQ9GZT5 417 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 TMEM222Q9H0R3 208 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 FAM60AQ9NP50 221 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 CDC42EP3Q9UKI2 254 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 COL4A6Q14031 1691 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 ATG2AQ2TAZ0 1938 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 IGKV1-9A0A0C4DH69 117 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 DLL1O00548 723 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 CHST1O43916 411 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 EFEMP2O95967 443 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 MT-ATP6P00846 226 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 IGHMP01871 453 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 WNT2P09544 360 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 CD99P14209 185 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 NTF4P34130 210 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 NPBWR2P48146 333 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 LHX2P50458 406 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 ZNF133P52736 654 aaPredicted RBP7.41□□□□□ -1.22
LSM5-208ENST00000450169 FOXL1Q12952 345 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 MRPL49Q13405 166 aaKnown RBP7.41□□□□□ -1.22
LSM5-208ENST00000450169 TESK1Q15569 626 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 KISS1Q15726 138 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 SNAI3Q3KNW1 292 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 UEVLDQ8IX04 471 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 CA13Q8N1Q1 262 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 TCTEX1D1Q8N7M0 179 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 OR4F5Q8NH21 305 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 ZNF596Q8TC21 504 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 OR4F4Q96R69 305 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 FAM103A1Q9BTL3 118 aaKnown RBP7.41□□□□□ -1.22
LSM5-208ENST00000450169 ELOVL5Q9NYP7 299 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 USP34Q70CQ2 3546 aa7.41□□□□□ -1.22
LSM5-208ENST00000450169 IGHV2-26A0A0B4J1V2 119 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 NPIPA2E9PIF3 369 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 SH2D1BO14796 132 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 MPPED1O15442 326 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 FAHP16930 419 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 ZNF17P17021 662 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 APOBEC3AP31941 199 aaPredicted RBP7.4□□□□□ -1.22
LSM5-208ENST00000450169 CLDN17P56750 224 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 SERF2P84101 59 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 ID3Q02535 119 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 HYAL1Q12794 435 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 ZP4Q12836 540 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 C20orf196Q8IYI0 205 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 ABHD3Q8WU67 409 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 LRRC3BQ96PB8 259 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 SIGLEC12Q96PQ1 595 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 APOOQ9BUR5 198 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 MOB1AQ9H8S9 216 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 OBP2AQ9NY56 170 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 UBE2J1Q9Y385 318 aaPredicted RBP7.4□□□□□ -1.22
LSM5-208ENST00000450169 PTRH2Q9Y3E5 179 aaKnown RBP7.4□□□□□ -1.22
LSM5-208ENST00000450169 PCNX3Q9H6A9 2034 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 PDE4DIPQ5VU43 2346 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 C5orf42Q9H799 3197 aa7.4□□□□□ -1.22
LSM5-208ENST00000450169 IGLC7A0M8Q6 106 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 H3BP45 60 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 CTXN2P0C2S0 81 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 GABRA2P47869 451 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 PAX9P55771 341 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 RIPPLY3P57055 190 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 MLF1P58340 268 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 ARF6P62330 175 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 TMEM267Q0VDI3 215 aaPredicted RBP7.4□□□□□ -1.23
LSM5-208ENST00000450169 PLPPR5Q32ZL2 321 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.4□□□□□ -1.231e-10■■■□□ 17.1
LSM5-208ENST00000450169 DEFB128Q7Z7B8 93 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 MYPOPQ86VE0 399 aaPredicted RBP7.4□□□□□ -1.23
LSM5-208ENST00000450169 OR2M7Q8NG81 312 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 OR5B3Q8NH48 314 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 C16orf52Q8NHV5 167 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 PINX1Q96BK5 328 aaKnown RBP7.4□□□□□ -1.23
LSM5-208ENST00000450169 VWCEQ96DN2 955 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 TMEM56Q96MV1 263 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 TIMM29Q9BSF4 260 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 MEGF9Q9H1U4 602 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 SLC39A9Q9NUM3 307 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 MRPL27Q9P0M9 148 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms