RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CCDC71LQ8N9Z2 235 aa11.9□□□□□ -0.51
USP39-207ENST00000450066 DEFB108BQ8NET1 73 aa11.9□□□□□ -0.51
USP39-207ENST00000450066 SECTM1Q8WVN6 248 aa11.9□□□□□ -0.51
USP39-207ENST00000450066 GALMQ96C23 342 aa11.9□□□□□ -0.51
USP39-207ENST00000450066 GALNT14Q96FL9 552 aa11.9□□□□□ -0.51
USP39-207ENST00000450066 NCOR1P1Q9H4R4 102 aa11.9□□□□□ -0.51
USP39-207ENST00000450066 NAA60Q9H7X0 242 aa11.9□□□□□ -0.51
USP39-207ENST00000450066 TMEM106BQ9NUM4 274 aa11.9□□□□□ -0.51
USP39-207ENST00000450066 OR1A1Q9P1Q5 309 aa11.9□□□□□ -0.51
USP39-207ENST00000450066 KCNIP3Q9Y2W7 256 aa11.9□□□□□ -0.51
USP39-207ENST00000450066 TRAV38-1A0A0B4J264 116 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 ODAMA1E959 279 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 LGALS8O00214 317 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 HSPA12AO43301 675 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 EDDM3AQ14507 147 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 PHLDA2Q53GA4 152 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 TPRX1Q8N7U7 411 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 OR11H4Q8NGC9 324 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 OR13A1Q8NGR1 328 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 MRGPRDQ8TDS7 321 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 CCL17Q92583 94 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 WDR89Q96FK6 387 aaPredicted RBP11.89□□□□□ -0.51
USP39-207ENST00000450066 GAFA1Q96PS6 74 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 SLC5A7Q9GZV3 580 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 FAM234AQ9H0X4 552 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 ZNF665Q9H7R5 613 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 RAB18Q9NP72 206 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 FLNCQ14315 2725 aa11.89□□□□□ -0.51
USP39-207ENST00000450066 HBZP02008 142 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 GZMHP20718 246 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 PPOXP50336 477 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 P2RX3P56373 397 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 RND3P61587 244 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 CR1LQ2VPA4 569 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 Q5BKY6 102 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 LDLRAD3Q86YD5 345 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 OR1L1Q8NH94 360 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 BBC3Q96PG8 261 aaPredicted RBP11.88□□□□□ -0.51
USP39-207ENST00000450066 DNTTIP1Q9H147 329 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 FBXO9Q9UK97 447 aaPredicted RBP11.88□□□□□ -0.51
USP39-207ENST00000450066 ARFGEF3Q5TH69 2177 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 PPIAL4EA0A075B759 164 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 IGHV1-69-2A0A0G2JMI3 117 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 PPIAL4DF5H284 164 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 GPR31O00270 319 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 GYPAP02724 150 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 PPIAL4FP0DN26 164 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 IL2RGP31785 369 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 CEACAM6P40199 344 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 ZNF818PQ6ZRF7 136 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 UBALD1Q8TB05 177 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 CCL13Q99616 98 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 RDH8Q9NYR8 311 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 PPIAL4AQ9Y536 164 aa11.88□□□□□ -0.51
USP39-207ENST00000450066 ABCA4P78363 2273 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 CCSO14618 274 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 SIGLEC5O15389 551 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 MPPED1O15442 326 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 CD8AP01732 235 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 IGFBP2P18065 325 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 CMTM1Q8IZ96 169 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 OR10V1Q8NGI7 309 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 VRK1Q99986 396 aaPredicted RBP11.87□□□□□ -0.51
USP39-207ENST00000450066 SUCNR1Q9BXA5 334 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 TOLLIPQ9H0E2 274 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 PRR13Q9NZ81 148 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 DSCAMO60469 2012 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 NKX6-3A6NJ46 265 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 SPINT2O43291 252 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 SELLP14151 372 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 SSTR5P35346 364 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 LUMP51884 338 aaPredicted RBP11.87□□□□□ -0.51
USP39-207ENST00000450066 EDDM3BP56851 147 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 LAMTOR1Q6IAA8 161 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 ARL11Q969Q4 196 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 PDCD10Q9BUL8 212 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 CCL28Q9NRJ3 127 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 CBLN4Q9NTU7 201 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 OR6C3Q9NZP0 311 aa11.87□□□□□ -0.51
USP39-207ENST00000450066 A0A1B0GW55 424 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 FAM25EA8MYX2 175 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 C15orf65H3BRN8 121 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 C19orf84I3L1E1 186 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 OR5AC1P0C628 307 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 DUX4L2P0CJ85 424 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 DUX4L3P0CJ86 424 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 DUX4L4P0CJ87 422 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 DUX4L5P0CJ88 424 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 DUX4L6P0CJ89 424 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 DUX4L7P0CJ90 424 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 HTD2P86397 168 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 TMEM187Q14656 261 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 DUX4L9Q6RFH8 374 aaPredicted RBP11.86□□□□□ -0.51
USP39-207ENST00000450066 GSG1LQ6UXU4 331 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 C9orf62Q8N4C0 152 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 FAM216BQ8N7L0 139 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 BVESQ8NE79 360 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 C14orf79Q96F83 325 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 DCTN5Q9BTE1 182 aa11.86□□□□□ -0.51
USP39-207ENST00000450066 DUX4Q9UBX2 424 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms