RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 DMRTA1Q5VZB9 504 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 ATOH7Q8N100 152 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 BORCS7Q96B45 105 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 UHRF2Q96PU4 802 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 HIST1H2BLQ99880 126 aa10.74□□□□□ -0.69
UBE3B-204ENST00000449510 C8orf33Q9H7E9 229 aaPredicted RBP10.74□□□□□ -0.69
UBE3B-204ENST00000449510 AKIRIN1Q9H9L7 192 aaPredicted RBP10.74□□□□□ -0.69
UBE3B-204ENST00000449510 CLDN15P56746 228 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 ZNF818PQ6ZRF7 136 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 TMPRSS7Q7RTY8 843 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 DTD1Q8TEA8 209 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 RNF166Q96A37 237 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-204ENST00000449510 RASL10BQ96S79 203 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 IL36RNQ9UBH0 155 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 NAT8Q9UHE5 227 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 NAT8BQ9UHF3 227 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 FOXD3Q9UJU5 478 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-204ENST00000449510 NOTCH3Q9UM47 2321 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-204ENST00000449510 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-204ENST00000449510 C11orf94C9JXX5 98 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 LDLRAD4O15165 306 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 CYB5R3P00387 301 aaPredicted RBP10.73□□□□□ -0.69
UBE3B-204ENST00000449510 TFPI2P48307 235 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 TAS2R60P59551 318 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 IL24Q13007 206 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 IGFBP7Q16270 282 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 HIKESHIQ53FT3 197 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 ANKRD37Q7Z713 158 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 CALHM1Q8IU99 346 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 CMTM2Q8TAZ6 248 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 SSMEM1Q8WWF3 244 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 VWCEQ96DN2 955 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 OR4C12Q96R67 309 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 HDGFL3Q9Y3E1 203 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 GJE1A6NN92 205 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 LMO7DNF2Z398 122 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 CDS2O95674 445 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 SUMO1P63165 101 aaKnown RBP10.73□□□□□ -0.69
UBE3B-204ENST00000449510 PRDX4Q13162 271 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 ACSM6Q6P461 480 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 VHLLQ6RSH7 139 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 TPRX1Q8N7U7 411 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 OR4X1Q8NH49 305 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 TAAR9Q96RI9 348 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 VSIRQ9H7M9 311 aa10.73□□□□□ -0.69
UBE3B-204ENST00000449510 LRRK1Q38SD2 2015 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 TRBV6-7A0A0A0MS04 114 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 PGPEP1LA6NFU8 196 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 TRAF3IP2O43734 574 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-204ENST00000449510 NDUFB4O95168 129 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 CD27P26842 260 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 ARG2P78540 354 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 SPEM2Q0P670 501 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 EIF3IQ13347 325 aaKnown RBP10.72□□□□□ -0.69
UBE3B-204ENST00000449510 ABHD3Q8WU67 409 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 MVB12AQ96EY5 273 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 AP1S3Q96PC3 154 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 GABRG3Q99928 467 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 HSPB9Q9BQS6 159 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 COL4A6Q14031 1691 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 HSPB1P04792 205 aaKnown RBP10.72□□□□□ -0.69
UBE3B-204ENST00000449510 G6PCP35575 357 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 PNRC1Q12796 327 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-204ENST00000449510 ZDHHC23Q8IYP9 409 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 HIST3H2BBQ8N257 126 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 TMEM222Q9H0R3 208 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 CDH20Q9HBT6 801 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 SELENOKQ9Y6D0 94 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 DBX1A6NMT0 343 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 GDF9O60383 454 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 GYPAP02724 150 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 IGKV3-11P04433 115 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 CD55P08174 381 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 CCL3P10147 92 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 RAB4AP20338 218 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 IER3P46695 156 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 UBE2NP61088 152 aaKnown RBP10.72□□□□□ -0.69
UBE3B-204ENST00000449510 PHYHD1Q5SRE7 291 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 PRAMEF5Q5TYX0 476 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 PRAMEF6Q5VXH4 476 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 DMRTC2Q8IXT2 367 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-204ENST00000449510 IMMP2LQ96T52 175 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 GINS3Q9BRX5 216 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 DNAH14Q0VDD8 3507 aa10.72□□□□□ -0.69
UBE3B-204ENST00000449510 OR7C2O60412 319 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 CRISP2P16562 243 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 ERVK-16P61578 105 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 ICAM4Q14773 271 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 Q6ZN92 141 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 CNEP1R1Q8N9A8 125 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 GALNT14Q96FL9 552 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 RAB40CQ96S21 281 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 CTDSP1Q9GZU7 261 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 ZNF586Q9NXT0 402 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 DUSP13Q9UII6 198 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 DENND4CQ5VZ89 1909 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 CREBBPQ92793 2442 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 A0A1W2PQD3 144 aa10.71□□□□□ -0.69
UBE3B-204ENST00000449510 PROB1E7EW31 1015 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms