RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PPIAL4CA0A0B4J2A2 164 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 IGKV1-6A0A0C4DH72 117 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 CENPXA8MT69 81 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 KIAA1324LA8MWY0 1029 aaPredicted RBP12.06□□□□□ -0.48
TNF-208ENST00000449264 FAM157AC9JC47 383 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 RNF223E7ERA6 249 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 C15orf65H3BRN8 121 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 SPINT2O43291 252 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 PPIAL4GP0DN37 164 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 TBPP20226 339 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 ASAH1Q13510 395 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 DYRK1AQ13627 763 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 PRSS57Q6UWY2 283 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 GINS4Q9BRT9 223 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 GAL3ST2Q9H3Q3 398 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 SLC23A1Q9UHI7 598 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 CR1P17927 2039 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 IGHV3-43A0A0B4J1X8 118 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 KBTBD11-OT1A0A1B0GTJ5 212 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 ZNF729A6NN14 1252 aaPredicted RBP12.06□□□□□ -0.48
TNF-208ENST00000449264 HSPA12AO43301 675 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 IFNA6P05013 189 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 IGHV3-43DP0DP04 118 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 GZMHP20718 246 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 TSPAN5P62079 268 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 MEF2DQ14814 521 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 C17orf58Q2M2W7 97 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 SCGB2B2Q4G0G5 96 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 PRAMEF5Q5TYX0 476 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 CD276Q5ZPR3 534 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 ZNF782Q6ZMW2 699 aaPredicted RBP12.06□□□□□ -0.48
TNF-208ENST00000449264 MAPK1IP1LQ8NDC0 245 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 WFDC11Q8NEX6 87 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 ZFAND2BQ8WV99 257 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 GALMQ96C23 342 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 CABLES2Q9BTV7 478 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 OR1A1Q9P1Q5 309 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 ONECUT1Q9UBC0 465 aa12.06□□□□□ -0.48
TNF-208ENST00000449264 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.05□□□□□ -0.48
TNF-208ENST00000449264 A8MXK9 166 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 FOXH1O75593 365 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 ZNF728P0DKX0 622 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 OR5H8P0DN80 308 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 CR1LQ2VPA4 569 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 VAX1Q5SQQ9 334 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 OVCH2Q7RTZ1 564 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 ZNF554Q86TJ5 538 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 OR10V1Q8NGI7 309 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 OR51S1Q8NGJ8 323 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 C8orf46Q8TAG6 207 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 CORO2AQ92828 525 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 SLC6A7Q99884 636 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 FOXC2Q99958 501 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 C7orf50Q9BRJ6 194 aaKnown RBP12.05□□□□□ -0.48
TNF-208ENST00000449264 TMPRSS13Q9BYE2 586 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 REG4Q9BYZ8 158 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 ITGB1BP2Q9UKP3 347 aa12.05□□□□□ -0.48
TNF-208ENST00000449264 FLNAP21333 2647 aaKnown RBP12.05□□□□□ -0.48
TNF-208ENST00000449264 A0A096LNT2 108 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 FAM172BPA6NC97 362 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 DISC1C4P0D8 188 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 LIPFP07098 398 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 NFYAP23511 347 aaPredicted RBP12.04□□□□□ -0.48
TNF-208ENST00000449264 NFYBP25208 207 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 ERVFRD-1P60508 538 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 GNMTQ14749 295 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 FAM53AQ6NSI3 398 aaPredicted RBP12.04□□□□□ -0.48
TNF-208ENST00000449264 MZT2BQ6NZ67 158 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 OR52L2PQ8NGH6 319 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 OR10J5Q8NHC4 309 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 DEDD2Q8WXF8 326 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 RAB9BQ9NP90 201 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 OR2S2Q9NQN1 319 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 TAS2R3Q9NYW6 316 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 OPN4Q9UHM6 478 aa12.04□□□□□ -0.48
TNF-208ENST00000449264 A0A1W2PPH5 198 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 NAP1L6A6NFF2 107 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 ENSAO43768 121 aaKnown RBP12.03□□□□□ -0.48
TNF-208ENST00000449264 MMP23AO75900 390 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 CTXN2P0C2S0 81 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 ZNF735P0CB33 412 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 CGB3P0DN86 165 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 CGB7P0DN87 165 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 FCGR2CP31995 323 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 BTCP35070 178 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 CCR6P51684 374 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 ENKURQ8TC29 256 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 ZNF2Q9BSG1 426 aaPredicted RBP12.03□□□□□ -0.48
TNF-208ENST00000449264 IDI2-AS1Q9NZ38 188 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 GNG12Q9UBI6 72 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 ZNF69Q9UC07 566 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 ZANQ9Y493 2812 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 AKAP9Q99996 3911 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 TRBV6-7A0A0A0MS04 114 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 NPIPB11E5RHQ5 1161 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 F2RL2O00254 374 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 IGHV3-7P01780 117 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 ZBTB25P24278 435 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 FPR2P25090 351 aa12.03□□□□□ -0.48
TNF-208ENST00000449264 PPP1CCP36873 323 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms