RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 SNAPC3Q92966 411 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 TRIM63Q969Q1 353 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 CCDC32Q9BV29 185 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 HIF1ANQ9NWT6 349 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 ZNF107Q9UII5 783 aaPredicted RBP12.03□□□□□ -0.48
SHANK2-210ENST00000449116 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 KPTNQ9Y664 436 aa12.03□□□□□ -0.48
SHANK2-210ENST00000449116 F2RL2O00254 374 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 LANCL1O43813 399 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 TGFAP01135 160 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 RBP4P02753 201 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 CSF1P09603 554 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 ARPC4P59998 168 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 PAX8Q06710 450 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 BAK1Q16611 211 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 TMEM30BQ3MIR4 351 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 CHRFAM7AQ494W8 412 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 PRAMEF5Q5TYX0 476 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 DCAF12L2Q5VW00 463 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 TRIQKQ629K1 86 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 OR52W1Q6IF63 320 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 HEPN1Q6WQI6 88 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 C1orf122Q6ZSJ8 110 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 C5orf24Q7Z6I8 188 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 C11orf42Q8N5U0 333 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 OR10A7Q8NGE5 316 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 GALMQ96C23 342 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 KIRREL1Q96J84 757 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 TAS2R8Q9NYW2 309 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 IDI2-AS1Q9NZ38 188 aa12.02□□□□□ -0.49
SHANK2-210ENST00000449116 ARHGAP32A7KAX9 2087 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 KIAA2026Q5HYC2 2103 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 J3QRK9 145 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 DIRAS3O95661 229 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 CTXN2P0C2S0 81 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 IGHV1-8P0DP01 117 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 ZNF16P17020 682 aaPredicted RBP12.01□□□□□ -0.49
SHANK2-210ENST00000449116 OMGP23515 440 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 FPR2P25090 351 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 HLA-DMAP28067 261 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 TAS2R46P59540 309 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 TAS2R19P59542 299 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 HTD2P86397 168 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 METTL11BQ5VVY1 283 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 LYSMD2Q8IV50 215 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 Q8N7P7 452 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 TMEM229BQ8NBD8 167 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 OR5AP2Q8NGF4 316 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 IL1F10Q8WWZ1 152 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 C18orf12Q96KH6 178 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 CABLES2Q9BTV7 478 aa12.01□□□□□ -0.49
SHANK2-210ENST00000449116 METTL8Q9H825 291 aaKnown RBP12.01□□□□□ -0.49
SHANK2-210ENST00000449116 MAP1AP78559 2803 aaPredicted RBP12.01□□□□□ -0.49
SHANK2-210ENST00000449116 YLPM1P49750 1951 aaKnown RBP12□□□□□ -0.49
SHANK2-210ENST00000449116 IGKV1-6A0A0C4DH72 117 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 ZNF736B4DX44 427 aaPredicted RBP12□□□□□ -0.49
SHANK2-210ENST00000449116 SDCBPO00560 298 aaPredicted RBP12□□□□□ -0.49
SHANK2-210ENST00000449116 MMP23AO75900 390 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 IL7P13232 177 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 MMP9P14780 707 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 INPP1P49441 399 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 ERVFRD-1P60508 538 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 HERPUD1Q15011 391 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 LTC4SQ16873 150 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 ACTBL2Q562R1 376 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 IGSF11Q5DX21 431 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 STEAP3Q658P3 488 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 TOMM5Q8N4H5 51 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 OR52M1Q8NGK5 317 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 OR5H2Q8NGV7 314 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 SIRPDQ9H106 197 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 UNKLQ9H9P5 680 aaKnown RBP12□□□□□ -0.49
SHANK2-210ENST00000449116 NECAP2Q9NVZ3 263 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 GFOD1Q9NXC2 390 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 SLC23A1Q9UHI7 598 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 JPT1Q9UK76 154 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 SESN1Q9Y6P5 492 aa12□□□□□ -0.49
SHANK2-210ENST00000449116 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12□□□□□ -0.498e-8■■■□□ 15.2
SHANK2-210ENST00000449116 TRBV6-7A0A0A0MS04 114 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 IGHV3-43A0A0B4J1X8 118 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 ANKRD20A5PA0PJZ0 165 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 J3QLI3 93 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 BET1O15155 118 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 TOX4O94842 621 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 PMP2P02689 132 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 CD74P04233 296 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 CD3DP04234 171 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 IGHV3-43DP0DP04 118 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 TBPP20226 339 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 PRTN3P24158 256 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 HRH1P35367 487 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 OR3A3P47888 321 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 LOXL3P58215 753 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 AP3S2P59780 193 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 CDK10Q15131 360 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 FAHD2BQ6P2I3 314 aaPredicted RBP11.99□□□□□ -0.49
SHANK2-210ENST00000449116 ZNF782Q6ZMW2 699 aaPredicted RBP11.99□□□□□ -0.49
SHANK2-210ENST00000449116 VMO1Q7Z5L0 202 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 OR52L2PQ8NGH6 319 aa11.99□□□□□ -0.49
SHANK2-210ENST00000449116 OR10J5Q8NHC4 309 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms