RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ZFAND1Q8TCF1 268 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 ADTRPQ96IZ2 230 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 SPRY4Q9C004 299 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 SLC2A9Q9NRM0 540 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 EHFQ9NZC4 300 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 HECTD1Q9ULT8 2610 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 BOLA2-SMG1P6H3BVE0 249 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 PRKYO43930 277 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 HPXP02790 462 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 SNRPD3P62318 126 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR5I1Q13606 314 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 DUX4L9Q6RFH8 374 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 ASCL4Q6XD76 172 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 KCTD9Q7L273 389 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 SYS1Q8N2H4 156 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 ANGPTL6Q8NI99 470 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 NIPSNAP1Q9BPW8 284 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 CNOT2Q9NZN8 540 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 E9PI62 339 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 SLC25A53Q5H9E4 307 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 C22orf42Q6IC83 251 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 C1orf122Q6ZSJ8 110 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 ABHD12Q8N2K0 398 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 C12orf43Q96C57 262 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 UHRF2Q96PU4 802 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 SLC25A15Q9Y619 301 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 CRXO43186 299 aaPredicted RBP4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 OPRK1P41145 380 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 APOC4P55056 127 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 ROM1Q03395 351 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 IZUMO4Q1ZYL8 232 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 C9orf66Q5T8R8 295 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR4A47Q6IF82 309 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR8H3Q8N146 312 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 KLHDC1Q8N7A1 406 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 Q8NA96 180 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 NHLRC2Q8NBF2 726 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 GPR32P1Q8NGA4 272 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 IL20Q9NYY1 176 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 IGKV3D-15A0A087WSY6 115 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 PGA4P0DJD7 388 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 PGA3P0DJD8 388 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 RPL23AP62750 156 aaKnown RBP4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 Q1RN00 199 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZBTB34Q8NCN2 500 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 SYNPO2LQ9H987 977 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 CD300AQ9UGN4 299 aa4.8□□□□□ -1.64
CDC42BPA-209ENST00000448940 IGHV1-18A0A0C4DH31 117 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 DVL1O14640 695 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 IGKV3-15P01624 115 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 IGHV3-11P01762 117 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 SEMG1P04279 462 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ISL1P61371 349 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 Q3ZCU0 254 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZFAND6Q6FIF0 208 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 CDH26Q8IXH8 852 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR2G2Q8NGZ5 317 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 TRAF4Q9BUZ4 470 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 TAS2R4Q9NYW5 299 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 OBSL1O75147 1896 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 AMY2AP04746 511 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 RFX2P48378 723 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 EIF5AP63241 154 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 IL34Q6ZMJ4 242 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF826PQ6ZT77 177 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 CALHM3Q86XJ0 350 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 C17orf51A8MQB3 221 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 SLC22A1O15245 554 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 MRPS14O60783 128 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 OR3A1P47881 315 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ERVK11-1P61568 191 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 SRPXP78539 464 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 PRB3Q04118 309 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 MESTQ5EB52 335 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 PXDC1Q5TGL8 231 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 SSX7Q7RTT5 188 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 INO80EQ8NBZ0 244 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 C10orf35Q96D05 121 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 BBC3Q96PG8 261 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 METTL26Q96S19 204 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 BET1LQ9NYM9 111 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 DPM3Q9P2X0 92 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ARRDC5A6NEK1 342 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 I3L521 148 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 TNFSF12O43508 249 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ORC5O43913 435 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZBTB25P24278 435 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 RPL5P46777 297 aaKnown RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 RNLSQ5VYX0 342 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 SLC25A47Q6Q0C1 308 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 MAVSQ7Z434 540 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ADGRE4PQ86SQ3 457 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 DPCDQ9BVM2 203 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 CENPVL1A0A0U1RR11 272 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 C1orf196B1AJZ1 125 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 ZNF736B4DX44 427 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 F5H697 171 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 CA11O75493 328 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 MGMTP16455 207 aa4.79□□□□□ -1.64
CDC42BPA-209ENST00000448940 TMEM41BQ5BJD5 291 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms