RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 CCL21O00585 134 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 HSPA12AO43301 675 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 PSPNO60542 156 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 ADAP1O75689 374 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 ZNF205O95201 554 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 ADH4P08319 380 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 HOXB5P09067 269 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 OR5AC1P0C628 307 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 TNFRSF1AP19438 455 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 GNRHRP30968 328 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 PRDX2P32119 198 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 NUP62P37198 522 aaPredicted RBP8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 BSPH1Q075Z2 132 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 LRRC37A5PQ49AS3 106 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 ACOT7LQ6ZUV0 252 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 C22orf34Q6ZV56 151 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 ZNF680Q8NEM1 530 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 ITLN1Q8WWA0 313 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 IL1F10Q8WWZ1 152 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 RNASE6Q93091 150 aaKnown RBP8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 AKR1E2Q96JD6 320 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 DNTTIP1Q9H147 329 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 HEXA-AS1Q9H8Q6 139 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 RDH8Q9NYR8 311 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 RNF7Q9UBF6 113 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 UBQLN2Q9UHD9 624 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 TNFSF18Q9UNG2 199 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 ASPMQ8IZT6 3477 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 MAP1BP46821 2468 aaKnown RBP8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 PHF1O43189 567 aaPredicted RBP8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 IGHV1-46P01743 117 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 RLN2P04090 185 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 CD55P08174 381 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 IRF2P14316 349 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 LUMP51884 338 aaPredicted RBP8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 COL10A1Q03692 680 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 IAH1Q2TAA2 248 aaPredicted RBP8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 PRSS54Q6PEW0 395 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 SLC51BQ86UW2 128 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 MOGAT3Q86VF5 341 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 LDLRAD3Q86YD5 345 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 KCNRGQ8N5I3 272 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 OR10V1Q8NGI7 309 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 Q8TCH9 128 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 GALMQ96C23 342 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 SNX22Q96L94 193 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 LURAP1Q96LR2 239 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 WFIKKN1Q96NZ8 548 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 TAF9BQ9HBM6 251 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 RAB9BQ9NP90 201 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 TMED3Q9Y3Q3 217 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 MGAQ8IWI9 3026 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 PRR14LQ5THK1 2151 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 KANTRA0A1W2PQU2 76 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 MGST3O14880 152 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 LHBP01229 141 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 WNT2P09544 360 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 PSG2P11465 335 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 S100A1P23297 94 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 IL2RGP31785 369 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 GABRA2P47869 451 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 OR3A1P47881 315 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 CEBPDP49716 269 aaPredicted RBP8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 RAB14P61106 215 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 SMCO1Q147U7 214 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 TESK1Q15569 626 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 ADIPOQQ15848 244 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 ANKRD39Q53RE8 183 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 KRBOX4Q5JUW0 171 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 NCMAPQ5T1S8 102 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 GGNBP1Q5YKI7 109 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 ZNF818PQ6ZRF7 136 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 TBC1D26Q86UD7 250 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 GCSAMQ8N6F7 178 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 OR5D13Q8NGL4 314 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 GLYATL2Q8WU03 294 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 FAM216AQ8WUB2 273 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 DCUN1D4Q92564 292 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 OR10C1Q96KK4 312 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 FANCD2OSQ96PS1 177 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 SPIN2AQ99865 258 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 SPIN2BQ9BPZ2 258 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 TMEM222Q9H0R3 208 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 NCOR1P1Q9H4R4 102 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 MBD2Q9UBB5 411 aa8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 ERRFI1Q9UJM3 462 aaPredicted RBP8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 UBE2J1Q9Y385 318 aaPredicted RBP8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 RBM7Q9Y580 266 aaKnown RBP8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 PRRC2CQ9Y520 2896 aaKnown RBP8.87□□□□□ -0.99
VIPAS39-203ENST00000448935 BAHCC1Q9P281 2608 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 IGKV1D-13A0A0B4J2D9 117 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 TUBAL3A6NHL2 446 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 LRRC30A6NM36 301 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 C17orf100A8MU93 164 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 HEXAP06865 529 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 CD3EP07766 207 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 OR4A8P0C604 315 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 IGKV1-13P0DP09 117 aa8.86□□□□□ -0.99
VIPAS39-203ENST00000448935 LYL1P12980 280 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms