RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 DHRS13Q6UX07 377 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 TMEM252Q8N6L7 170 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 OR2Y1Q8NGV0 311 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 AURKAIP1Q9NWT8 199 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-204ENST00000448183 TUBD1Q9UJT1 453 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 ZNF318Q5VUA4 2279 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 IGHV1OR15-9A0A0B4J2B8 117 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 MT-CO3P00414 261 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 MMP9P14780 707 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 C10orf113Q5VZT2 155 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 LINC00596Q86U02 117 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 LILRB1Q8NHL6 650 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-204ENST00000448183 TP53RKQ96S44 253 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 RNF122Q9H9V4 155 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 TINAGQ9UJW2 476 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 PPIHO43447 177 aaKnown RBP6.8□□□□□ -1.32
NEDD9-204ENST00000448183 DNPH1O43598 174 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 MT-ND6P03923 174 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 RUNX1Q01196 453 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 SRSF9Q13242 221 aaKnown RBP eCLIP6.8□□□□□ -1.32
NEDD9-204ENST00000448183 SLC35E4Q6ICL7 350 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 OR1K1Q8NGR3 316 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 PTPMT1Q8WUK0 201 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-204ENST00000448183 FBLIM1Q8WUP2 373 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 FLYWCH2Q96CP2 140 aaKnown RBP6.8□□□□□ -1.32
NEDD9-204ENST00000448183 HDHD3Q9BSH5 251 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-204ENST00000448183 TMEM38BQ9NVV0 291 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 OR5AC2Q9NZP5 309 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 IL19Q9UHD0 177 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 WNK3Q9BYP7 1800 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 PAPPA2Q9BXP8 1791 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 LOC102724200A0A096LPH7 203 aaPredicted RBP6.8□□□□□ -1.32
NEDD9-204ENST00000448183 MFSD2BA6NFX1 497 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 TCF21O43680 179 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 SPINK2P20155 84 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 IFITM2Q01629 132 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 CD200R1LQ6Q8B3 271 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 LDLRAD3Q86YD5 345 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 TUSC5Q8IXB3 177 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 ZPLD1Q8TCW7 415 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 PRSS27Q9BQR3 290 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 TMEM204Q9BSN7 226 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 GPR35Q9HC97 309 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 AP5S1Q9NUS5 200 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 KLHDC2Q9Y2U9 406 aa6.8□□□□□ -1.32
NEDD9-204ENST00000448183 CFDP00746 253 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-204ENST00000448183 TRGC2P03986 189 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 HSPB1P04792 205 aaKnown RBP6.79□□□□□ -1.32
NEDD9-204ENST00000448183 FCGR3AP08637 254 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 MDKP21741 143 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-204ENST00000448183 MFAP2P55001 183 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 TXNDC17Q9BRA2 123 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 GPR132Q9UNW8 380 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 COL24A1Q17RW2 1714 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 TRAV39A0A0B4J263 110 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 TRBV5-5A0A0J9YX44 114 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 CENPVL1A0A0U1RR11 272 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 FAM157AC9JC47 383 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 SYNGR1O43759 233 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 RBM11P57052 281 aaKnown RBP6.79□□□□□ -1.32
NEDD9-204ENST00000448183 TGIF2LYQ8IUE0 185 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 OR8I2Q8N0Y5 310 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 OR8A1Q8NGG7 326 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 OR1L8Q8NGR8 309 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 GMPPAQ96IJ6 420 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-204ENST00000448183 HARBI1Q96MB7 349 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 OR4C12Q96R67 309 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 RASL11BQ9BPW5 248 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 PCOLCE2Q9UKZ9 415 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 TRIP11Q15643 1979 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 K7EQS6 105 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 TMPRSS2O15393 492 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 GCGP01275 180 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 HBZP02008 142 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 LIMS1P48059 325 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 SRSF5Q13243 272 aaKnown RBP6.79□□□□□ -1.32
NEDD9-204ENST00000448183 FAM209BQ5JX69 171 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 ZNF738Q8NE65 137 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 OR2M3Q8NG83 312 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 LHX9Q9NQ69 397 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 PIPOXQ9P0Z9 390 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 DLEC1Q9Y238 1755 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 M0R296 226 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 KCNAB3O43448 404 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 FCARP24071 287 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 SRP14P37108 136 aaKnown RBP6.79□□□□□ -1.32
NEDD9-204ENST00000448183 MEF2BQ02080 365 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-204ENST00000448183 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 Q8WTZ3 238 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 RAB1CQ92928 201 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 MARVELD3Q96A59 401 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 UCN2Q96RP3 112 aa6.79□□□□□ -1.32
NEDD9-204ENST00000448183 SVILO95425 2214 aa6.78□□□□□ -1.32
NEDD9-204ENST00000448183 RHBDL1O75783 438 aa6.78□□□□□ -1.32
NEDD9-204ENST00000448183 CD1BP29016 333 aa6.78□□□□□ -1.32
NEDD9-204ENST00000448183 LGALS7P47929 136 aa6.78□□□□□ -1.32
NEDD9-204ENST00000448183 DLX1P56177 255 aa6.78□□□□□ -1.32
NEDD9-204ENST00000448183 SPINK14Q6IE38 97 aa6.78□□□□□ -1.32
NEDD9-204ENST00000448183 ZNF788Q6ZQV5 615 aa6.78□□□□□ -1.32
NEDD9-204ENST00000448183 HSPB9Q9BQS6 159 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms