RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 RIIAD1A6NNX1 92 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 PRSS47A8MTI9 375 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 SH2D1BO14796 132 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 MAGEB3O15480 346 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 PAGE4O60829 102 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 GAPDHP04406 335 aaKnown RBP4.46□□□□□ -1.7
USP49-205ENST00000448078 ANOS1P23352 680 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 CDK2P24941 298 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 NFYBP25208 207 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 ERP29P30040 261 aaKnown RBP4.46□□□□□ -1.7
USP49-205ENST00000448078 RRM2P31350 389 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 SOX6P35712 828 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 ARL3P36405 182 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 RPS27P42677 84 aaKnown RBP4.46□□□□□ -1.7
USP49-205ENST00000448078 OMPP47874 163 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 CDC42P60953 191 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 ACTR3P61158 418 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 RUNX1Q01196 453 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 MAPRE2Q15555 327 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 CLVS2Q5SYC1 327 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 LDLRAD2Q5SZI1 272 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 RNLSQ5VYX0 342 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 METTL21CQ5VZV1 264 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 ASRGL1Q7L266 308 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 KRT77Q7Z794 578 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 SMIM29Q86T20 159 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 MOB3BQ86TA1 216 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 LINC00471Q8N535 108 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 C5orf56Q8N8D9 126 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 OR51L1Q8NGJ5 315 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 OR10X1Q8NGY0 326 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 OR2T10Q8NGZ9 312 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 OR9G1Q8NH87 305 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 THAP6Q8TBB0 222 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 RNF133Q8WVZ7 376 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 DCUN1D4Q92564 292 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 MCUR1Q96AQ8 359 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 C7orf26Q96N11 449 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 INTS14Q96SY0 518 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 ABHD6Q9BV23 337 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 BARHL1Q9BZE3 327 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 SCRT2Q9NQ03 307 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 STUB1Q9UNE7 303 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 BAIAP2Q9UQB8 552 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 PIGLQ9Y2B2 252 aa4.46□□□□□ -1.7
USP49-205ENST00000448078 A0A0U1RQV5 110 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 TMEM269A0A1B0GVZ9 245 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 MEX3AA1L020 520 aaKnown RBP4.45□□□□□ -1.7
USP49-205ENST00000448078 BBIP1A8MTZ0 92 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 FAM220BPB1ANY3 271 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 C12orf77C9JDV5 145 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 LINC01619G3V211 115 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 DLGAP1O14490 977 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 FFAR1O14842 300 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 GADD45GO95257 159 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 IGLV1-47P01700 117 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 IGHG4P01861 327 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 LYNP07948 512 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 PTGFRP43088 359 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 GLIPR1P48060 266 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 GZMMP51124 257 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 CRYBA2P53672 197 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 CD81P60033 236 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 IL24Q13007 206 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 HLA-DRB5Q30154 266 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 COQ5Q5HYK3 327 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 ARPINQ7Z6K5 226 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 VTCN1Q7Z7D3 282 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 ERI1Q8IV48 349 aaKnown RBP4.45□□□□□ -1.7
USP49-205ENST00000448078 OR6N2Q8NGY6 317 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 OR52J3Q8NH60 311 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 OR56B4Q8NH76 319 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 DYDC1Q8WWB3 177 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 CORO2AQ92828 525 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 FAM162AQ96A26 154 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 CEP19Q96LK0 163 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 ZNF488Q96MN9 340 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 TEX12Q9BXU0 123 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 MROQ9BYG7 248 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 PKIBQ9C010 78 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 ABCG5Q9H222 651 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 FN3KQ9H479 309 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 IL1RAPQ9NPH3 570 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 WSB1Q9Y6I7 421 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 COMMD3-BMI1R4GMX3 469 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 RYR1P21817 5038 aa4.45□□□□□ -1.7
USP49-205ENST00000448078 IGLV5-45A0A087WSX0 123 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 FAM230AA0A1W2PPH8 454 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 ZNF729A6NN14 1252 aaPredicted RBP4.44□□□□□ -1.7
USP49-205ENST00000448078 MRASO14807 208 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 HAND1O96004 215 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 IGKV1D-33P01593 117 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 IGKV1-33P01594 117 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 OCM2P0CE71 109 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 OCMP0CE72 109 aaPredicted RBP4.44□□□□□ -1.7
USP49-205ENST00000448078 ZNF3P17036 446 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 ACKR3P25106 362 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 IL3RAP26951 378 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 CD34P28906 385 aa4.44□□□□□ -1.7
USP49-205ENST00000448078 OPRL1P41146 370 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms