RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ZNF737O75373 536 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 MPZL1O95297 269 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 TNFSF4P23510 183 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 HOXC12P31275 282 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 FASLGP48023 281 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 RHOGP84095 191 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 NSDHLQ15738 373 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 DEFB133Q30KQ1 61 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 SPACA5Q96QH8 159 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 HSPB9Q9BQS6 159 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 LANCL2Q9NS86 450 aa16.54■□□□□ 0.24
HMGA1-205ENST00000447654 MCTS1Q9ULC4 181 aaKnown RBP16.54■□□□□ 0.24
HMGA1-205ENST00000447654 METTL12A8MUP2 240 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 HS3ST1O14792 307 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 CD38P28907 300 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 PPP1CBP62140 327 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 MSMO1Q15800 293 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 OCIAD2Q56VL3 154 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 LCN15Q6UWW0 184 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 RNF144BQ7Z419 303 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 OR2M7Q8NG81 312 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 OR5D18Q8NGL1 313 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 OR5B3Q8NH48 314 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 RPUSD4Q96CM3 377 aaKnown RBP16.53■□□□□ 0.24
HMGA1-205ENST00000447654 SLAMF6Q96DU3 332 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 ZNF703Q9H7S9 590 aaPredicted RBP16.53■□□□□ 0.24
HMGA1-205ENST00000447654 CST7O76096 145 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 ONECUT2O95948 504 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 CD27P26842 260 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 SHBQ15464 509 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 ZNF726P1Q15940 193 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 EXT1Q16394 746 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 PNKDQ8N490 385 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 SCGB1C1Q8TD33 95 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 APH1AQ96BI3 265 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 TXN2Q99757 166 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 TMEM222Q9H0R3 208 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 LIME1Q9H400 295 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 MRPL27Q9P0M9 148 aaKnown RBP16.53■□□□□ 0.24
HMGA1-205ENST00000447654 RPH3ALQ9UNE2 315 aa16.53■□□□□ 0.24
HMGA1-205ENST00000447654 MDH2P40926 338 aaKnown RBP16.52■□□□□ 0.24
HMGA1-205ENST00000447654 MRPS34P82930 218 aaKnown RBP16.52■□□□□ 0.24
HMGA1-205ENST00000447654 LINC00346Q8IVM7 164 aa16.52■□□□□ 0.24
HMGA1-205ENST00000447654 OR51E1Q8TCB6 317 aa16.52■□□□□ 0.24
HMGA1-205ENST00000447654 CHODLQ9H9P2 273 aa16.52■□□□□ 0.24
HMGA1-205ENST00000447654 SLC35D1Q9NTN3 355 aa16.52■□□□□ 0.24
HMGA1-205ENST00000447654 UNC13CQ8NB66 2214 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 ZNF850A8MQ14 1090 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 GYPAP02724 150 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 SPATA45Q537H7 98 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 Q6ZN92 141 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 TNFRSF14Q92956 283 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 PARLQ9H300 379 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 ZNF286AQ9HBT8 521 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 RYDENQ9NUL5 291 aaKnown RBP16.51■□□□□ 0.23
HMGA1-205ENST00000447654 TRAV9-1A0A075B6T8 112 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 A0A0U1RQK1 487 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 ZNF320A2RRD8 509 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 NPIPB13A6NJU9 1138 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 NPIPB4C9JG80 1138 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 HYPMO75409 117 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 BMI1P35226 326 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 PSMB3P49720 205 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 PHLDA2Q53GA4 152 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 DOK3Q7L591 496 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 TMPRSS7Q7RTY8 843 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 CPEB2Q7Z5Q1 589 aaKnown RBP16.51■□□□□ 0.23
HMGA1-205ENST00000447654 PGAM5Q96HS1 289 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 PLEKHJ1Q9NW61 149 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 B3GALT1Q9Y5Z6 326 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 ARID1BQ8NFD5 2236 aaPredicted RBP16.51■□□□□ 0.23
HMGA1-205ENST00000447654 FREM3P0C091 2139 aa16.51■□□□□ 0.23
HMGA1-205ENST00000447654 PIGBOS1A0A0B4J2F0 54 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 C3orf85A0A1B0GTC6 90 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 PLPP3O14495 311 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 TSPO2Q5TGU0 170 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 TMEM217Q8N7C4 229 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 ZNF709Q8N972 641 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 CST9LQ9H4G1 147 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 ZNF586Q9NXT0 402 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 NXT1Q9UKK6 140 aaKnown RBP16.5■□□□□ 0.23
HMGA1-205ENST00000447654 VDAC3Q9Y277 283 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 IGHV1-69-2A0A0G2JMI3 117 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 K7ERU9 68 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 CDKN1AP38936 164 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 EFNA3P52797 238 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 Q0VG73 95 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 ZNF154Q13106 437 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 C17orf82Q86X59 251 aaPredicted RBP16.5■□□□□ 0.23
HMGA1-205ENST00000447654 TCTEX1D1Q8N7M0 179 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 GPR146Q96CH1 333 aa16.5■□□□□ 0.23
HMGA1-205ENST00000447654 MMABQ96EY8 250 aaPredicted RBP16.5■□□□□ 0.23
HMGA1-205ENST00000447654 NBEAP1P0C6P0 100 aa16.49■□□□□ 0.23
HMGA1-205ENST00000447654 MYF5P13349 255 aa16.49■□□□□ 0.23
HMGA1-205ENST00000447654 IGLV3-21P80748 117 aaPredicted RBP16.49■□□□□ 0.23
HMGA1-205ENST00000447654 KISS1Q15726 138 aa16.49■□□□□ 0.23
HMGA1-205ENST00000447654 GATSQ8NAP1 163 aa16.49■□□□□ 0.23
HMGA1-205ENST00000447654 MRPL30Q8TCC3 161 aaKnown RBP16.49■□□□□ 0.23
HMGA1-205ENST00000447654 PRTFDC1Q9NRG1 225 aa16.49■□□□□ 0.23
HMGA1-205ENST00000447654 RP1P56715 2156 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms