RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 CLRN3Q8NCR9 226 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 BVESQ8NE79 360 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR52M1Q8NGK5 317 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 CNTNAP3BQ96NU0 1288 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR2V2Q96R30 315 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 CNTNAP3Q9BZ76 1288 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 TREM2Q9NZC2 230 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 KCNIP1Q9NZI2 227 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 METRNQ9UJH8 293 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 DNASE2O00115 360 aaPredicted RBP8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 IGHV3-13P01766 116 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 CD40P25942 277 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 GABRA2P47869 451 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 SELENOVP59797 346 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 FLI1Q01543 452 aaPredicted RBP8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 SMIM21Q3B7S5 101 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 LDLRAD3Q86YD5 345 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 H1FOOQ8IZA3 346 aaPredicted RBP8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 TMEM171Q8WVE6 324 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 DMRTA2Q96SC8 542 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 TMEM222Q9H0R3 208 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 TLNRD1Q9H1K6 362 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 SAV1Q9H4B6 383 aaPredicted RBP8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR2S2Q9NQN1 319 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 DNAJB11Q9UBS4 358 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 PFDN2Q9UHV9 154 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 TUBD1Q9UJT1 453 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 KCNS2Q9ULS6 477 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 PPP1R3CQ9UQK1 317 aa8.02□□□□□ -1.13
COL6A4P1-201ENST00000446690 IGHV3OR15-7A0A075B7D8 119 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 TMEM30CPA0ZSE6 113 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 K7EPK0 472 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 PGLYRP1O75594 196 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 MBPP02686 304 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR8U9P0C7N5 309 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 S100GP29377 79 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 CCKARP32238 428 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR3A1P47881 315 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 NKX6-1P78426 367 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 RBPJQ06330 500 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 MOB1BQ7L9L4 216 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 MOGAT3Q86VF5 341 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 LURAP1LQ8IV03 231 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 PDZD9Q8IXQ8 264 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 FAM71E2Q8N5Q1 922 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 LRTM2Q8N967 370 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR10V1Q8NGI7 309 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR8U1Q8NH10 309 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR51H1Q8NH63 302 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 MRPL37Q9BZE1 423 aaKnown RBP8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 CACNA1GO43497 2377 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 NKX2-6A6NCS4 301 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 ABCD4O14678 606 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 DEDDO75618 318 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 LYL1P12980 280 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 ZNF16P17020 682 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 EGR1P18146 543 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 LMO1P25800 156 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 PRDX2P32119 198 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 EDDM3AQ14507 147 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 C3orf36Q3SXR2 165 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 KRBOX4Q5JUW0 171 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 TMEM108Q6UXF1 575 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 CLEC9AQ6UXN8 241 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 HSD17B13Q7Z5P4 300 aaPredicted RBP8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 CD177Q8N6Q3 437 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 OR1L1Q8NH94 360 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 MRGPRDQ8TDS7 321 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 CABLES2Q9BTV7 478 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 DNTTIP1Q9H147 329 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 ESRP2Q9H6T0 727 aaKnown RBP8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 ELOVL5Q9NYP7 299 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 ZNF835Q9Y2P0 537 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 TMED3Q9Y3Q3 217 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 WIPI2Q9Y4P8 454 aa8.01□□□□□ -1.13
COL6A4P1-201ENST00000446690 ANKRD11Q6UB99 2663 aaPredicted RBP8□□□□□ -1.13
COL6A4P1-201ENST00000446690 CUL9Q8IWT3 2517 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 ACACAQ13085 2346 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 TRGV8A0A0C4DH27 118 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 NXPH3O95157 252 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 HKR1P10072 659 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 RPL12P30050 165 aaKnown RBP8□□□□□ -1.13
COL6A4P1-201ENST00000446690 IL2RGP31785 369 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 GLIPR1P48060 266 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 RND3P61587 244 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 RPS23P62266 143 aaKnown RBP8□□□□□ -1.13
COL6A4P1-201ENST00000446690 SRPXP78539 464 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 TESK1Q15569 626 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 SELENOHQ8IZQ5 122 aaKnown RBP8□□□□□ -1.13
COL6A4P1-201ENST00000446690 ITLN1Q8WWA0 313 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 GALMQ96C23 342 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 MEGF10Q96KG7 1140 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 AQP10Q96PS8 301 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 SMIM3Q9BZL3 60 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 PARP12Q9H0J9 701 aaKnown RBP8□□□□□ -1.13
COL6A4P1-201ENST00000446690 MBNL3Q9NUK0 354 aaKnown RBP8□□□□□ -1.13
COL6A4P1-201ENST00000446690 RNF150Q9ULK6 438 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 SHANK1Q9Y566 2161 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 PIEZO2Q9H5I5 2752 aa8□□□□□ -1.13
COL6A4P1-201ENST00000446690 ATXN7O15265 892 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms