RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 SELLP14151 372 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 RAB3AP20336 220 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 ANOS1P23352 680 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 AZGP1P25311 298 aaKnown RBP5.6□□□□□ -1.51
HDAC9-216ENST00000446646 PSMA1P25786 263 aaKnown RBP5.6□□□□□ -1.51
HDAC9-216ENST00000446646 CHATP28329 748 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 POU3F4P49335 361 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 NANOS3P60323 173 aaKnown RBP5.6□□□□□ -1.51
HDAC9-216ENST00000446646 GABARAPL2P60520 117 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 DCTN2Q13561 401 aaKnown RBP5.6□□□□□ -1.51
HDAC9-216ENST00000446646 GAMTQ14353 236 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 SPCS2Q15005 226 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 MED22Q15528 200 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 LRRC75BQ2VPJ9 315 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 LRRC10Q5BKY1 277 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 FAM76BQ5HYJ3 339 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 PLAC9Q5JTB6 97 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 OR2G6Q5TZ20 316 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 TEX36Q5VZQ5 186 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 PRSS48Q7RTY5 328 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 FAM90A1Q86YD7 464 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 MKXQ8IYA7 352 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 SYT8Q8NBV8 401 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 OR5AN1Q8NGI8 311 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 TRMT10AQ8TBZ6 339 aaKnown RBP5.6□□□□□ -1.51
HDAC9-216ENST00000446646 NPRL2Q8WTW4 380 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 UFD1Q92890 307 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 RPL3LQ92901 407 aaKnown RBP5.6□□□□□ -1.51
HDAC9-216ENST00000446646 TMEM106AQ96A25 262 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 SEH1LQ96EE3 360 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 MED30Q96HR3 178 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 TMEM68Q96MH6 324 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 DUX3Q96PT4 197 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 GPER1Q99527 375 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 S100A13Q99584 98 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 PDCD1LG2Q9BQ51 273 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 YTHDF1Q9BYJ9 559 aaKnown RBP5.6□□□□□ -1.51
HDAC9-216ENST00000446646 FAM192AQ9GZU8 254 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 RHOFQ9HBH0 211 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 VCX3AQ9NNX9 186 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 PCDHB16Q9NRJ7 776 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 SORL1Q92673 2214 aa5.6□□□□□ -1.51
HDAC9-216ENST00000446646 PQLC2LA1A4F0 135 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 H3BSH0 61 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 WRBO00258 174 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 AKR7A2O43488 359 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 DENRO43583 198 aaKnown RBP5.59□□□□□ -1.51
HDAC9-216ENST00000446646 NDUFB3O43676 98 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 SPDEFO95238 335 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 MT-ND2P03891 347 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 CD1AP06126 327 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 ATF1P18846 271 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 CELP19835 753 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 CRHBPP24387 322 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 CD1BP29016 333 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 C21orf33P30042 268 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-216ENST00000446646 MTCP1P56278 107 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 RPP30P78346 268 aaKnown RBP5.59□□□□□ -1.51
HDAC9-216ENST00000446646 ACSM1Q08AH1 577 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 GPR50Q13585 617 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 SPHARQ15513 63 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 TRAM1Q15629 374 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 Q499Y3 187 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 SAPCD1Q5SSQ6 148 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 DMKNQ6E0U4 476 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-216ENST00000446646 ZNF826PQ6ZT77 177 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 ZNF367Q7RTV3 350 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 RDH10Q8IZV5 341 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 MS4A15Q8N5U1 240 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 PARP16Q8N5Y8 322 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 GCSAMQ8N6F7 178 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 FAM216BQ8N7L0 139 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 NANOGP1Q8N7R0 232 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 POC1AQ8NBT0 407 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 OR13C9Q8NGT0 318 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 GATAD1Q8WUU5 269 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 AQP3Q92482 292 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 FCGR1BQ92637 280 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 FGGYQ96C11 551 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 MEGF9Q9H1U4 602 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 OR51I2Q9H344 312 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 PAK1IP1Q9NWT1 392 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-216ENST00000446646 NLKQ9UBE8 527 aa5.59□□□□□ -1.51
HDAC9-216ENST00000446646 PNMA8CA0A1B0GUJ8 204 aa5.58□□□□□ -1.52
HDAC9-216ENST00000446646 A6NDX4 124 aa5.58□□□□□ -1.52
HDAC9-216ENST00000446646 A6NIN4 97 aa5.58□□□□□ -1.52
HDAC9-216ENST00000446646 SH2D7A6NKC9 451 aaPredicted RBP5.58□□□□□ -1.52
HDAC9-216ENST00000446646 OR2AT4A6NND4 320 aa5.58□□□□□ -1.52
HDAC9-216ENST00000446646 OGG1O15527 345 aa5.58□□□□□ -1.52
HDAC9-216ENST00000446646 NOS1APO75052 506 aaPredicted RBP5.58□□□□□ -1.52
HDAC9-216ENST00000446646 ZNF780AO75290 641 aaPredicted RBP5.58□□□□□ -1.52
HDAC9-216ENST00000446646 JTBO76095 146 aa5.58□□□□□ -1.52
HDAC9-216ENST00000446646 APOA1P02647 267 aa5.58□□□□□ -1.52
HDAC9-216ENST00000446646 PLA2G1BP04054 148 aaKnown RBP5.58□□□□□ -1.52
HDAC9-216ENST00000446646 ACAA1P09110 424 aaPredicted RBP5.58□□□□□ -1.52
HDAC9-216ENST00000446646 HSMCR30P0CW71 290 aa5.58□□□□□ -1.52
HDAC9-216ENST00000446646 PGA5P0DJD9 388 aa5.58□□□□□ -1.52
HDAC9-216ENST00000446646 CTRB1P17538 263 aa5.58□□□□□ -1.52
HDAC9-216ENST00000446646 MPZP25189 248 aa5.58□□□□□ -1.52
HDAC9-216ENST00000446646 VDAC2P45880 294 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms