RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 APCSP02743 223 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 CALB1P05937 261 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 CD99P14209 185 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 PRTN3P24158 256 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 EVI2BP34910 448 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 CD79BP40259 229 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 RPS10P46783 165 aaKnown RBP2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 RAB25P57735 213 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 ESRRGP62508 458 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 REEP5Q00765 189 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 MEF2CQ06413 473 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 SMAGPQ0VAQ4 97 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 SPIN4Q56A73 249 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 CST9Q5W186 159 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 CD200R1LQ6Q8B3 271 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 MUC15Q8N387 334 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR4K5Q8NGD3 323 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR5D18Q8NGL1 313 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR6K3Q8NGY3 331 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 ERMNQ8TAM6 284 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 RAB8BQ92930 207 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 TESCQ96BS2 214 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 PPCDCQ96CD2 204 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 PDXPQ96GD0 296 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 CCDC42Q96M95 316 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 PACRGQ96M98 296 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZNF382Q96SR6 550 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 STACQ99469 402 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 CDX2Q99626 313 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 TBL1XR1Q9BZK7 514 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 MAP1LC3AQ9H492 121 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 C8orf17Q9NRJ1 99 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 BDP1A6H8Y1 2624 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 PRUNE2Q8WUY3 3088 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 LTBP1Q14766 1721 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 QSER1Q2KHR3 1735 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 PPIP5K1Q6PFW1 1433 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 HTTP42858 3142 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 ANKRD36BQ8N2N9 1353 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 TRAV8-3A0A0A6YYJ7 113 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 IGHV7-4-1A0A0J9YVY3 117 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 A0A1W2PP18 115 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 TMEM72A0PK05 275 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 C8orf87E5RJ46 101 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 PANO1I0J062 215 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 GYG2O15488 501 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 SULT1B1O43704 296 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZNF861PO60384 105 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 IFNA6P05013 189 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZNF688P0C7X2 276 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 PSG2P11465 335 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 RPS12P25398 132 aaKnown RBP2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 PYCR1P32322 319 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 DYNLL1P63167 89 aaKnown RBP2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 LOXL1Q08397 574 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 ACSM3Q53FZ2 586 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 RNASE13Q5GAN3 156 aaKnown RBP2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 UBE2NLQ5JXB2 153 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 SPNS3Q6ZMD2 512 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 NTM-AS1Q6ZSK4 140 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 MTERF4Q7Z6M4 381 aaKnown RBP2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 SLC25A29Q8N8R3 303 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR5W2Q8NH69 310 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 FXYD5Q96DB9 178 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 RNF157Q96PX1 679 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 LINC01587Q99440 93 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 WSB1Q9Y6I7 421 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 CRYBG1Q9Y4K1 1723 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 VPS8Q8N3P4 1428 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 COL18A1P39060 1754 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 E9PCH4 1651 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 TNRC6CQ9HCJ0 1690 aaKnown RBP2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 ADAMTS7Q9UKP4 1686 aa2.92□□□□□ -1.94
HMGB1P48-201ENST00000446155 VIRMAQ69YN4 1812 aaKnown RBP2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 EIF3AQ14152 1382 aaKnown RBP2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 LOC102724200A0A096LPH7 203 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 A0A1W2PQL4 384 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 CD300LBA8K4G0 201 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 TMEM114B3SHH9 223 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 TRIM49D1C9J1S8 452 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 SLC37A4O43826 429 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 PLIN3O60664 434 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 CYB5R3P00387 301 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 SNRPAP09012 282 aaKnown RBP2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR56A5P0C7T3 313 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 ME2P23368 584 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 ADORA1P30542 326 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 CBX5P45973 191 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 IDH2P48735 452 aaKnown RBP2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 RAP1GDS1P52306 607 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 WNT4P56705 351 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 MRPS25P82663 173 aaKnown RBP2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 SYCNQ0VAF6 134 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 CDC20Q12834 499 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 MPPED2Q15777 294 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 SSX1Q16384 188 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 LINC00303Q3SY05 128 aa2.91□□□□□ -1.94
HMGB1P48-201ENST00000446155 YIF1BQ5BJH7 314 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms