RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 HPRT1P00492 218 aa11.96□□□□□ -0.49
VPS52-212ENST00000445902 NRASP01111 189 aa11.96□□□□□ -0.49
VPS52-212ENST00000445902 PRAMEF20Q5VT98 475 aa11.96□□□□□ -0.49
VPS52-212ENST00000445902 TOMM20LQ6UXN7 152 aa11.96□□□□□ -0.49
VPS52-212ENST00000445902 TGIF2LYQ8IUE0 185 aa11.96□□□□□ -0.49
VPS52-212ENST00000445902 PIGCQ92535 297 aa11.96□□□□□ -0.49
VPS52-212ENST00000445902 GPR146Q96CH1 333 aa11.96□□□□□ -0.49
VPS52-212ENST00000445902 MS4A10Q96PG2 267 aa11.96□□□□□ -0.49
VPS52-212ENST00000445902 P2RX4Q99571 388 aa11.96□□□□□ -0.49
VPS52-212ENST00000445902 KBTBD11O94819 623 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 IFNA1P01562 189 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 IGKV1D-33P01593 117 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 IGKV1-33P01594 117 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 DEFA4P12838 97 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 CCKARP32238 428 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 ZNF92Q03936 586 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 CNN3Q15417 329 aaKnown RBP11.96□□□□□ -0.5
VPS52-212ENST00000445902 FAM78BQ5VT40 261 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 Q6ZRM9 215 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 WDR5BQ86VZ2 330 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 NEK7Q8TDX7 302 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 MBD3L1Q8WWY6 194 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 RLN3Q8WXF3 142 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 SPTSSAQ969W0 71 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 NABP1Q96AH0 204 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 KLHDC7BQ96G42 594 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 SLC39A9Q9NUM3 307 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 OR6C3Q9NZP0 311 aa11.96□□□□□ -0.5
VPS52-212ENST00000445902 KIR2DL5BA0A0G2JN68 375 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 KIR2DL5BA0A0G2JPC4 375 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 UBE2L5PA0A1B0GUS4 154 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 MYF5P13349 255 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 EIF3IQ13347 325 aaKnown RBP11.95□□□□□ -0.5
VPS52-212ENST00000445902 C1orf53Q5VUE5 145 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 KIR2DL5AQ8N109 375 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 MRPL30Q8TCC3 161 aaKnown RBP11.95□□□□□ -0.5
VPS52-212ENST00000445902 EXTL1Q92935 676 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 UCN2Q96RP3 112 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 GRIFINA4D1Z8 144 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 LINC01565O15544 149 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 CA3P07451 260 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 EGR1P18146 543 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 UCP1P25874 307 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 GCH1P30793 250 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 RBM11P57052 281 aaKnown RBP11.95□□□□□ -0.5
VPS52-212ENST00000445902 PLCXD3Q63HM9 321 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 HAPLN4Q86UW8 402 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 ZNF525Q8N782 197 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 DTD1Q8TEA8 209 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 PARD6AQ9NPB6 346 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 PAM16Q9Y3D7 125 aa11.95□□□□□ -0.5
VPS52-212ENST00000445902 C3orf80F5H4A9 247 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 LILRA1O75019 489 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 GYPAP02724 150 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 PSG2P11465 335 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 SUMO3P55854 103 aaPredicted RBP11.94□□□□□ -0.5
VPS52-212ENST00000445902 OR1D5P58170 312 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 TRA2AQ13595 282 aaKnown RBP eCLIP11.94□□□□□ -0.5
VPS52-212ENST00000445902 ZNF468Q5VIY5 522 aaPredicted RBP11.94□□□□□ -0.5
VPS52-212ENST00000445902 HS3ST6Q96QI5 342 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 IL36RNQ9UBH0 155 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 FASLGP48023 281 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 DAZAP2Q15038 168 aaPredicted RBP11.94□□□□□ -0.5
VPS52-212ENST00000445902 ACOT6Q3I5F7 207 aaPredicted RBP11.94□□□□□ -0.5
VPS52-212ENST00000445902 TMEM41BQ5BJD5 291 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 SPANXN5Q5MJ07 72 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 OR8G2PQ6IF36 304 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 TCF23Q7RTU1 214 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 RPP25LQ8N5L8 163 aaKnown RBP11.94□□□□□ -0.5
VPS52-212ENST00000445902 HIPK2Q9H2X6 1198 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 LPAR2Q9HBW0 351 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 PSENENQ9NZ42 101 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 CACNG5Q9UF02 275 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 PTRH2Q9Y3E5 179 aaKnown RBP11.94□□□□□ -0.5
VPS52-212ENST00000445902 A0A0U1RQK1 487 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 ZNF320A2RRD8 509 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 AQP7P3A6NL99 342 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 OR10J1P30954 320 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 OTX1P32242 354 aaPredicted RBP11.94□□□□□ -0.5
VPS52-212ENST00000445902 BLKP51451 505 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 RPS16P62249 146 aaKnown RBP11.94□□□□□ -0.5
VPS52-212ENST00000445902 OR5I1Q13606 314 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 TMEM240Q5SV17 173 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 TMEM211Q6ICI0 200 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 LHFPL2Q6ZUX7 228 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 ZNF573Q86YE8 665 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 OR10V1Q8NGI7 309 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 ZNF845Q96IR2 970 aaPredicted RBP11.94□□□□□ -0.5
VPS52-212ENST00000445902 ABHD14BQ96IU4 210 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 OR4C12Q96R67 309 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 MRPS18CQ9Y3D5 142 aaKnown RBP11.94□□□□□ -0.5
VPS52-212ENST00000445902 TRAPPC1Q9Y5R8 145 aa11.94□□□□□ -0.5
VPS52-212ENST00000445902 BRWD1Q9NSI6 2320 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 C1QTNF9BB2RNN3 333 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 IL3RAP26951 378 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 TNFSF10P50591 281 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 MRPS11P82912 194 aaKnown RBP11.93□□□□□ -0.5
VPS52-212ENST00000445902 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.93□□□□□ -0.5
VPS52-212ENST00000445902 ZDHHC23Q8IYP9 409 aa11.93□□□□□ -0.5
VPS52-212ENST00000445902 ZNF611Q8N823 705 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms