RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 SERPINE2P07093 398 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 ARF1P84077 181 aaKnown RBP12.14□□□□□ -0.47
ERCC3-203ENST00000445889 OR8B8Q15620 311 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 SPATA46Q5T0L3 261 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 FAM90A2PQ658T7 463 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 ZNF787Q6DD87 383 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 SLC35E3Q7Z769 313 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 STX12Q86Y82 276 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 INTS12Q96CB8 462 aaKnown RBP12.14□□□□□ -0.47
ERCC3-203ENST00000445889 RBMXL1Q96E39 390 aaKnown RBP12.14□□□□□ -0.47
ERCC3-203ENST00000445889 PACRGQ96M98 296 aaPredicted RBP12.14□□□□□ -0.47
ERCC3-203ENST00000445889 PLK3Q9H4B4 646 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 RBM7Q9Y580 266 aaKnown RBP12.14□□□□□ -0.47
ERCC3-203ENST00000445889 CFAP47Q6ZTR5 3102 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 LOC102723971A0A1B0GUV8 181 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 CEBPZOSA8MTT3 80 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 PATE3B3GLJ2 98 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 TOX3O15405 576 aaPredicted RBP12.14□□□□□ -0.47
ERCC3-203ENST00000445889 SPINK14Q6IE38 97 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 C1orf87Q8N0U7 546 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 CABLES2Q9BTV7 478 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 SIRT7Q9NRC8 400 aa12.14□□□□□ -0.47
ERCC3-203ENST00000445889 ADAMTS20P59510 1910 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 DOCK11Q5JSL3 2073 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 P04436 131 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 CELA3AP09093 270 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 UCP1P25874 307 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 GDF1P27539 372 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 SPANXN5Q5MJ07 72 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 AGBL5Q8NDL9 886 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 OR5T1Q8NG75 326 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 IFI44Q8TCB0 444 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 UFSP2Q9NUQ7 469 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 NOSIPQ9Y314 301 aaKnown RBP12.13□□□□□ -0.47
ERCC3-203ENST00000445889 PHOX2AO14813 284 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 RHBDL1O75783 438 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 HBE1P02100 147 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 BMP5P22003 454 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 TESK1Q15569 626 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 FAM185AQ8N0U4 392 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 PLA2G3Q9NZ20 509 aa12.13□□□□□ -0.47
ERCC3-203ENST00000445889 A0A087X0M5 115 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 A0A1B0GX30 115 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 CLDN34H7C241 214 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
ERCC3-203ENST00000445889 NAPSAO96009 420 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 MMP7P09237 267 aaPredicted RBP12.12□□□□□ -0.47
ERCC3-203ENST00000445889 SELEP16581 610 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 F2RP25116 425 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 Q0VFX4 171 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 CLN3Q13286 438 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 SP5Q6BEB4 398 aaPredicted RBP12.12□□□□□ -0.47
ERCC3-203ENST00000445889 OR8G2PQ6IF36 304 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 PCSK4Q6UW60 755 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 ZDHHC23Q8IYP9 409 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 SAP25Q8TEE9 199 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 ZDBF2Q9HCK1 2354 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 TRAPPC2LH3BP13 241 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 WDR1O75083 606 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 PTBP3O95758 552 aaKnown RBP12.12□□□□□ -0.47
ERCC3-203ENST00000445889 MLF1P58340 268 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 BAXQ07812 192 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 MRPL21Q7Z2W9 205 aaKnown RBP12.12□□□□□ -0.47
ERCC3-203ENST00000445889 DMRTC2Q8IXT2 367 aaPredicted RBP12.12□□□□□ -0.47
ERCC3-203ENST00000445889 OR8G5Q8NG78 346 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 SCGB1C1Q8TD33 95 aa12.12□□□□□ -0.47
ERCC3-203ENST00000445889 NCKAP5O14513 1909 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 CEP192Q8TEP8 1941 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 BCL2P10415 239 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 DDTP30046 118 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 CXCL12P48061 93 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 IL24Q13007 206 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 RTP5Q14D33 572 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 ADIRFQ15847 76 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 C3AR1Q16581 482 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 GATAD1Q8WUU5 269 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 HIST1H2BLQ99880 126 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 HES7Q9BYE0 225 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 RBKSQ9H477 322 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 IL36GQ9NZH8 169 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 KCNS2Q9ULS6 477 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 GAB2Q9UQC2 676 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 DCHS1Q96JQ0 3298 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 MRPL33O75394 65 aaKnown RBP12.11□□□□□ -0.47
ERCC3-203ENST00000445889 IGKV1-39P01597 117 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 IGKV1D-39P04432 117 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 IL2RGP31785 369 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 TUSC5Q8IXB3 177 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 OR2V1Q8NHB1 315 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 RPUSD4Q96CM3 377 aaKnown RBP12.11□□□□□ -0.47
ERCC3-203ENST00000445889 SF3B5Q9BWJ5 86 aaKnown RBP12.11□□□□□ -0.47
ERCC3-203ENST00000445889 PRDM6Q9NQX0 595 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 AURKAIP1Q9NWT8 199 aaPredicted RBP12.11□□□□□ -0.47
ERCC3-203ENST00000445889 RNF150Q9ULK6 438 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 GPR179Q6PRD1 2367 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 DOCK10Q96BY6 2186 aa12.11□□□□□ -0.47
ERCC3-203ENST00000445889 LOC102723996A0A087X1L8 192 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 A0A1B0GU03 582 aa12.1□□□□□ -0.47
ERCC3-203ENST00000445889 SMCO3A2RU48 225 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms