RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 UTS2O95399 124 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 ATP5IP56385 69 aaPredicted RBP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 NR2C2APQ86WQ0 139 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 IRF7Q92985 503 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 QTRT1Q9BXR0 403 aaKnown RBP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 PTRH2Q9Y3E5 179 aaKnown RBP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 ZNF732B4DXR9 585 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 SOCS1O15524 211 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 ACTL6BO94805 426 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 NDUFB4O95168 129 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 TIMP2P16035 220 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 CBLN1P23435 193 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 OR1C1Q15619 314 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 KISS1Q15726 138 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 ZFAND6Q6FIF0 208 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 FAM71F2Q6NXP2 309 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 TBC1D26Q86UD7 250 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 ZNF611Q8N823 705 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 OR2I1PQ8NGU4 316 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 MVB12AQ96EY5 273 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 PAAF1Q9BRP4 392 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 TMEM38BQ9NVV0 291 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 ZNF256Q9Y2P7 627 aaPredicted RBP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 POLR2AP24928 1970 aaKnown RBP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 H3BNC9 293 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 ZNF217O75362 1048 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 TNFP01375 233 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 CRYAAP02489 173 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 TSPOP30536 169 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 CLDN18P56856 261 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 ACTL10Q5JWF8 245 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 TIMM23BQ5SRD1 257 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 LHX8Q68G74 356 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 CLDN23Q96B33 292 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 MMP25Q9NPA2 562 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 SLC7A10Q9NS82 523 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 C19orf25Q9UFG5 118 aaPredicted RBP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 OR2W1Q9Y3N9 320 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 K7N7A8 449 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 HSPB6O14558 160 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 CD5LO43866 347 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 PPBPP02775 128 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 OR3A4PP47883 348 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 PSMB2P49721 201 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 TMEM50BP56557 158 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 CLDN15P56746 228 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 NTHL1P78549 312 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 C1orf100Q5SVJ3 147 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 APOBEC3DQ96AK3 386 aaPredicted RBP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 KLF16Q9BXK1 252 aaPredicted RBP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 AURKAIP1Q9NWT8 199 aaPredicted RBP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 SHROOM3Q8TF72 1996 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 IL6RP08887 468 aaPredicted RBP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 PF4V1P10720 104 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 RND2P52198 227 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 SUB1P53999 127 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCN11A-202ENST00000444237 MFAP2P55001 183 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 OR10J3Q5JRS4 329 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 TSPO2Q5TGU0 170 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 MMD2Q8IY49 270 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 C20orf196Q8IYI0 205 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 OR10AC1Q8NH08 325 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 LIPHQ8WWY8 451 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 OR8B2Q96RD0 313 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 IL36BQ9NZH7 164 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 HCSTQ9UBK5 93 aa4.51□□□□□ -1.69
SCN11A-202ENST00000444237 CEACAM8P31997 349 aaPredicted RBP4.5□□□□□ -1.69
SCN11A-202ENST00000444237 EMDP50402 254 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 RPL23P62829 140 aaKnown RBP4.5□□□□□ -1.69
SCN11A-202ENST00000444237 LRRC10Q5BKY1 277 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 C9orf50Q5SZB4 431 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 ANKRD33Q7Z3H0 272 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 ANKRD37Q7Z713 158 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 FBXL14Q8N1E6 418 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 AGBL5Q8NDL9 886 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 OR4X2Q8NGF9 303 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 OR8A1Q8NGG7 326 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 OR1N2Q8NGR9 330 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 OR52E5Q8NH55 327 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 RNASE8Q8TDE3 154 aaKnown RBP4.5□□□□□ -1.69
SCN11A-202ENST00000444237 GPR35Q9HC97 309 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 SH2D2AQ9NP31 389 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 SPHK2Q9NRA0 654 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 HS3ST3B1Q9Y662 390 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 MRPS18BQ9Y676 258 aaKnown RBP4.5□□□□□ -1.69
SCN11A-202ENST00000444237 A0A0J9YY10 115 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 K7EP13 123 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 ZNF324O75467 553 aaPredicted RBP4.5□□□□□ -1.69
SCN11A-202ENST00000444237 MMP23AO75900 390 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 DUSP3P51452 185 aaPredicted RBP4.5□□□□□ -1.69
SCN11A-202ENST00000444237 ZNF121P58317 390 aaPredicted RBP4.5□□□□□ -1.69
SCN11A-202ENST00000444237 TMEM240Q5SV17 173 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 OTPQ5XKR4 325 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 RFLNAQ6ZTI6 216 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 LILRA3Q8N6C8 439 aaPredicted RBP4.5□□□□□ -1.69
SCN11A-202ENST00000444237 RCC1LQ96I51 464 aaKnown RBP4.5□□□□□ -1.69
SCN11A-202ENST00000444237 MRPL13Q9BYD1 178 aaKnown RBP4.5□□□□□ -1.69
SCN11A-202ENST00000444237 TPSD1Q9BZJ3 242 aa4.5□□□□□ -1.69
SCN11A-202ENST00000444237 SSUH2Q9Y2M2 353 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms