RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PYCARD-AS1I3L0S3 204 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 B3GALNT1O75752 331 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 SP6Q3SY56 376 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 SAXO1Q8IYX7 474 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 OR13C8Q8NGS7 320 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 OR4S2Q8NH73 311 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 REPIN1Q9BWE0 567 aaKnown RBP12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 PIPOXQ9P0Z9 390 aa12.08□□□□□ -0.48
SMARCA4-204ENST00000444061 PTPRSQ13332 1948 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 IGHV1-18A0A0C4DH31 117 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 A0A1W2PP11 408 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 DFFBO76075 338 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 RBMXL1Q96E39 390 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 ABHD1Q96SE0 405 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 ZGRF1Q86YA3 2104 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 PPIAL4CA0A0B4J2A2 164 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FBXO24O75426 580 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 PPIAL4GP0DN37 164 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 ZDHHC22Q8N966 263 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 OR4A4PQ8NGN8 299 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 DYRK2Q92630 601 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 LOC105371242A0A075B767 164 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 TRBV5-7A0A0A0MS05 114 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 MUC1P15941 1255 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 ZNF266Q14584 549 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 VSTM2AQ8TAG5 236 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A10PA6NDY2 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A18PA6NE21 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A16PA6NEW6 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A20PA6NIJ5 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A8PA6NJQ4 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A7PA6NKC0 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A22PA8MWA6 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A12PA8MX19 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A5PA8MXJ8 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A23PA8MXZ1 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 M0QZ24 198 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A15PP0C7V4 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A13PP0C7W8 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A14PP0C7W9 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 FAM90A24PP0C7X0 464 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 SULT1A3P0DMM9 295 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 SULT1A4P0DMN0 295 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 GCSAMQ8N6F7 178 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 TMEM104Q8NE00 496 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 ADGRG7Q96K78 797 aa12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 STRAPQ9Y3F4 350 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-204ENST00000444061 CEBPDP49716 269 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 UBE2MP61081 183 aaKnown RBP12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 C17orf107Q6ZR85 190 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 GLCCI1Q86VQ1 547 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 A0A1W2PNU3 283 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 IAPPP10997 89 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 EFNB2P52799 333 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 ARF6P62330 175 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 C1orf100Q5SVJ3 147 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 OR10P1Q8NGE3 313 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 RASL11BQ9BPW5 248 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 HES4Q9HCC6 221 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 IL5P05113 134 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 ZNF154Q13106 437 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 USF3Q68DE3 2245 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 ODAMA1E959 279 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 Q6ZRG5 221 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 C14orf79Q96F83 325 aa12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 MRPL37Q9BZE1 423 aaKnown RBP12.06□□□□□ -0.48
SMARCA4-204ENST00000444061 IL24Q13007 206 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 ZNF362Q5T0B9 420 aaPredicted RBP12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 ZNF561Q8N587 486 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 NIPSNAP3BQ9BS92 247 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 RALYQ9UKM9 306 aaKnown RBP12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 SNRNP200O75643 2136 aaKnown RBP12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 IQCF6A8MYZ5 107 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 SSSCA1O60232 199 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 ARG1P05089 322 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 DCAF12L2Q5VW00 463 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 MAGT1Q9H0U3 335 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 PUS1Q9Y606 427 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 K7N7A8 449 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 PPP1CCP36873 323 aaKnown RBP12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 RPS4Y2Q8TD47 263 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 PPYP01298 95 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 HDHD3Q9BSH5 251 aaPredicted RBP12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 LPAR5Q9H1C0 372 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 PROK2Q9HC23 129 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 FKBP11Q9NYL4 201 aa12.05□□□□□ -0.48
SMARCA4-204ENST00000444061 NOTCH2Q04721 2471 aa12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 ADAMTS9Q9P2N4 1935 aa12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 LIPFP07098 398 aa12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 KIAA0141Q14154 515 aaPredicted RBP12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 HSD17B11Q8NBQ5 300 aa12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 CORO2AQ92828 525 aa12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 OR2W1Q9Y3N9 320 aa12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 C3orf85A0A1B0GTC6 90 aa12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 A0A1W2PPE3 182 aa12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 FRZBQ92765 325 aa12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 TMEM230Q96A57 120 aa12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
SMARCA4-204ENST00000444061 C2orf50Q96LR7 162 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms