RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 GFOD1Q9NXC2 390 aa10.36□□□□□ -0.75
PDLIM2-212ENST00000443561 RAB22AQ9UL26 194 aa10.36□□□□□ -0.75
PDLIM2-212ENST00000443561 HSF4Q9ULV5 492 aa10.36□□□□□ -0.75
PDLIM2-212ENST00000443561 TBL2Q9Y4P3 447 aaKnown RBP10.36□□□□□ -0.75
PDLIM2-212ENST00000443561 TRBV6-6A0A0A6YYG2 114 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 hCG_1809904A0A1W2PP81 198 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 A0A1W2PPE2 198 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 A0A1W2PR64 198 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 A0A1W2PRV1 198 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 VGLL3A8MV65 326 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 H3BUX3 64 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 TRIM77I1YAP6 450 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 GPR137BO60478 399 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 NFYBP25208 207 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 RAB13P51153 203 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 ZNF134P52741 427 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 VBP1P61758 197 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 RBM39Q14498 530 aaKnown RBP10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 PLA1AQ53H76 456 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 TMEM86BQ8N661 226 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 SSMEM1Q8WWF3 244 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 ZDHHC16Q969W1 377 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 PTX4Q96A99 478 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 NEDD4LQ96PU5 975 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 JMJD8Q96S16 334 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 URM1Q9BTM9 101 aaKnown RBP10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 PARP12Q9H0J9 701 aaKnown RBP10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 TAF9BQ9HBM6 251 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 POMT1Q9Y6A1 747 aa10.35□□□□□ -0.75
PDLIM2-212ENST00000443561 IGKV1-6A0A0C4DH72 117 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 TMEM89A2RUT3 159 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 FAM181BA6NEQ2 426 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 BUB1B-PAK6H3BSN5 160 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 J3QR06 171 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 CA11O75493 328 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 GNG10P50151 68 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 DYNC1I2Q13409 638 aaKnown RBP10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 SSX2Q16385 188 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 LRRC75BQ2VPJ9 315 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 MINOS1Q5TGZ0 78 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 C16orf87Q6PH81 154 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 ANKRD13BQ86YJ7 626 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 ZNF565Q8N9K5 539 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 OR10A7Q8NGE5 316 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 OR52L2PQ8NGH6 319 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 OR10R2Q8NGX6 335 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 SSX3Q99909 188 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 ZMAT3Q9HA38 289 aaKnown RBP10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 VCX3AQ9NNX9 186 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 C1RLQ9NZP8 487 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 VPREB3Q9UKI3 123 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 TRAPPC2LQ9UL33 140 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 HILPDAQ9Y5L2 63 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 MINOS1-NBL1R4GNA1 71 aa10.34□□□□□ -0.75
PDLIM2-212ENST00000443561 IGKV1D-8A0A087WSZ0 117 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 A0A1W2PPI3 338 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 HKR1P10072 659 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 HIST1H1DP16402 221 aaKnown RBP10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 GNB3P16520 340 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 GZMHP20718 246 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 HERPUD1Q15011 391 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 TIMM50Q3ZCQ8 353 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 TPTE2P1Q5T6R2 138 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 OR52W1Q6IF63 320 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 RBMS3Q6XE24 437 aaKnown RBP10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 Q6ZTK2 550 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 OR56B1Q8NGI3 324 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 OR10V1Q8NGI7 309 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 OR52M1Q8NGK5 317 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 OR9G1Q8NH87 305 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 CFHR4Q92496 578 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 ST6GALNAC6Q969X2 333 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 MALSU1Q96EH3 234 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 MMP28Q9H239 520 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 Q9N2K0 584 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 PLEKHJ1Q9NW61 149 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 FAM96BQ9Y3D0 163 aa10.33□□□□□ -0.76
PDLIM2-212ENST00000443561 A6NDX4 124 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 SDCBPO00560 298 aaPredicted RBP10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 SSX5O60225 188 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 CD24P25063 80 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 HTR1DP28221 377 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 COMPP49747 757 aaPredicted RBP10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 LY6EQ16553 131 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 AANATQ16613 207 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 ZNF260Q3ZCT1 412 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 CT45A1Q5HYN5 189 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 C6orf183Q5T699 404 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 IDNKQ5T6J7 187 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 GPR107Q5VW38 600 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 SLC25A48Q6ZT89 311 aaKnown RBP10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 ODF3L1Q8IXM7 274 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 PRR18Q8N4B5 295 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 LINC00311Q8N616 119 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 CT45A3Q8NHU0 189 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 NDNFQ8TB73 568 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 MAFIPQ8WZ33 124 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 SLC25A46Q96AG3 418 aa10.32□□□□□ -0.76
PDLIM2-212ENST00000443561 RAB3CQ96E17 227 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms